DRSC/TRiP Functional Genomics Resources

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Protein Alignment frma and nep-18

DIOPT Version :9

Sequence 1:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_494297.1 Gene:nep-18 / 186911 WormBaseID:WBGene00019343 Length:701 Species:Caenorhabditis elegans


Alignment Length:745 Identity:156/745 - (20%)
Similarity:275/745 - (36%) Gaps:221/745 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VGLLVVQVKSHPQA--DPCQNFYKVACGNWSASHATDSYESFMDRLDYNYQEKLADLLDNEREDD 74
            ||:|.: :|::..|  |||::|::..||.:|.....|:...::......|| ..|......:.:.
 Worm    33 VGVLAM-IKNYQNASVDPCEDFFEHTCGRYSEHVMDDNSWGYVQYKQLLYQ-VFAIARKTNKFNS 95

  Fly    75 EPHFLQQLRNFYTAC--RKPLSQD--QVLR--ILEH--LIVMENIQNEE-----------LSVGL 120
            :|:  :|||.|..:|  ||.:.:|  |.||  |.|.  ..:::...|||           ||:..
 Worm    96 KPN--EQLRIFTKSCLDRKEMDEDTFQDLRNDIEERGGFPMIDPNWNEEKFDLSDMLAKYLSINR 158

  Fly   121 TAAFRLQV----LIDLNDSNTYDIWKQLMSHRKHWDPN---------------------TTNREP 160
            .....|.|    .|:.|.|    :.:..:|...||..|                     ..||| 
 Worm   159 NRMGFLSVEPYAAIEGNKS----VNRLYVSPGPHWVYNWAMGISIYKDSVAFMLRRLLKLENRE- 218

  Fly   161 LTREMFDKLWASLPKIPFPFK-----------------------------EYYWREL-------- 188
            |...::||.:|.|.::...|.                             |..|.::        
 Worm   219 LNETIYDKEFAELVQLEANFSTLADYRNLALDNDNMSKSRNLTDLVKMIPEIDWIKILKALARHG 283

  Fly   189 --SELEEKIMS----YGSEDDGFDSGDLVTRIPPFWMMPWPNGNITYENLSQMAHWLDIKANEFI 247
              .|.|||::.    :|:.:..|.....:.||            .|....|.:|::|.::....:
 Worm   284 TSEEDEEKLLERVTVHGAGEYFFGENRELARI------------ATETPKSALANYLVVRQLIDV 336

  Fly   248 LTYIYMRLKLVAEGVSTESWHIDRDQ---------------CAEQSRQILSHPAA-WLVEKNHPR 296
            ..|.|                 |:||               ||.|.......|:. ..:|.:..:
 Worm   337 ALYFY-----------------DKDQPRQNKFYNHVDQQSFCATQVASFFPMPSMNVFIESSQFK 384

  Fly   297 LKEEPVLQDIFAELKQRFGQKLLANRNNFTR-STQHFLLGKLKRMRLRLSILPRNSSAQSMVRRI 360
            ::...|::::|.::|..:.|  :...|.:.. ..:.||:.||..:..:.. |.:.:..:.:   :
 Worm   385 IENLKVIEEMFVKIKAEYEQ--IFTENEYLELEIREFLIRKLNAIDGKFG-LDQYTEGKPL---L 443

  Fly   361 ERHYRDVHMNASDYFGNLHIGLNHSRSHKKYAQLWAIVFGRQLIPSRISKSDLYPTQVRGYGTYA 425
            |:.|..::.            |:.....:.|.::|. .:..||:...:..:.|.|..::.:||:|
 Worm   444 EKMYETLNF------------LDTDSPWQVYMKMWR-HWSEQLVEHIVHDTPLDPVNLKMFGTHA 495

  Fly   426 SAFYIVKQNMLIVPLSLLEPPFYTHGQPSILTYSALGFILGHELSHGFDSEGMTFSSHGVGSSAV 490
            :  |....|...:.|..|..|:.....|:...|..||:::|||:.|.||.              .
 Worm   496 A--YQPYPNHFYINLPYLTYPWMDADFPANTNYGYLGYVIGHEIGHAFDH--------------F 544

  Fly   491 DRELDRNPRFQQ-------------EL--GCLRRRFG--------------RKRYEKFADASGLE 526
            .|:||.:.|.||             ||  .|||.::.              ..|||...|..|:.
 Worm   545 HRKLDESGRQQQYWFTETNSSNTEYELREKCLRDQYSAYKEPGYDFFMNGTHCRYEIAGDHMGIR 609

  Fly   527 LAYSAYFDTAQTDHKRNRSAEELVTQKQQFFHNFAQFFCS-------DKELLQAHDHGSDRKRVN 584
            .|:..:....:.|..|....|  ::::|.||:|:|...|.       .:.:| |..|.::|.|||
 Worm   610 TAFRVFEKVKKEDRFRLPGLE--MSEEQLFFYNYAFRQCDVYNPNKLPRNML-ARQHPTNRYRVN 671

  Fly   585 DAVAHFEPFREAFSC---GPSPRRRQCRLY 611
            ..:.:...|.|||:|   .|.....:|:||
 Worm   672 GVIQNIPEFAEAFNCPKNSPMNPEMKCKLY 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frmaNP_572226.2 GluZincin 25..601 CDD:301352 148/720 (21%)
nep-18NP_494297.1 PepO 42..692 CDD:226118 148/724 (20%)
M13 47..699 CDD:189000 148/726 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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