DRSC/TRiP Functional Genomics Resources

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Protein Alignment frma and nep-22

DIOPT Version :10

Sequence 1:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_509528.1 Gene:nep-22 / 181144 WormBaseID:WBGene00020788 Length:798 Species:Caenorhabditis elegans


Alignment Length:703 Identity:130/703 - (18%)
Similarity:226/703 - (32%) Gaps:214/703 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VGLLVVQVKSHPQADPCQNFYKVACGNWSASHATDSYESFMDRLDYNYQEKLADLLDNEREDDEP 76
            ||.|...:.|....|..:|  .:..|....|.|.|.|..         .:.:|::  |:|..|..
 Worm   204 VGTLTYTIASSDYKDHTKN--ALYTGPPGLSLARDFYVK---------PQYIAEV--NQRVSDVN 255

  Fly    77 HFLQQLRNFYTACRKPLSQDQVLRILEHLIVMENIQNEELSVGLTAAFRLQVLIDLNDS-NTYDI 140
            ..|....|   |.:|.:..|.:|...:.::      |.|:.:.: |::...:|.:.... |.|:|
 Worm   256 DLLTAFAN---AAKKNVGADALLAAAQEVV------NFEVQIAM-ASWPDDLLRNYQQQYNPYNI 310

  Fly   141 -----------WKQLMSHRKH----------------------W-----DPNTTNREPLTREMFD 167
                       ||..:....|                      |     |..|:|...:...|..
 Worm   311 ASATTAYRAINWKSYLGQLFHGVASDADQANYNIVVTEPSYFAWLNSVFDGKTSNSTVVANYMIA 375

  Fly   168 KLWA--------SLPKIPFPFKEYYW-----RELSELEEKIMSYGSED-DGFDSG--DLVTRIPP 216
            :|.|        :..|:.......::     |.:.::.::  .|...| ||...|  ||:|.   
 Worm   376 QLLADESDFINPATAKVSSDTNYIHYALRNGRGIKKIGKR--EYRMADLDGISEGCMDLLTA--- 435

  Fly   217 FWMMPWPNGNITYENLSQMAHWLDIKANEFILTYIYMRLKLVAEGVSTESWHIDRDQCAEQSRQI 281
              .||:..|                        |:|::.|.....|..:        ..:|:..|
 Worm   436 --YMPYGTG------------------------YVYVKSKSERNKVQAD--------VKDQTTLI 466

  Fly   282 LSH------PAAWL--VEKNHPRLKEEPVLQDIFAELKQRFG--QKLLANRNNFTRSTQHFLLGK 336
            :::      ...|:  ..||....|.:        .|.:.||  :.:..:.|:||          
 Worm   467 INNFQGMIDSLNWMDTFSKNRAHNKSD--------SLVKNFGWPEAMFGDFNDFT---------- 513

  Fly   337 LKRMRLRLSILPRNSSAQSMVRRIERHYRDVHMNASDYFGNLHIGLNHSRSHKKYAQLWAIVFGR 401
                    ::...|....|::....:...|::    ..|..|..|:......:        :.|.
 Worm   514 --------TVDAYNQDYASIIDLYTKDKNDIY----GIFAVLKKGMEVREFFR--------IMGE 558

  Fly   402 QLIPSRISKSDLYPTQVRGYGTYASAFYIVKQNMLIVPLSLLEPPFYTHGQPSILTYSALGFILG 466
            ....:...:|   |..|       :|:|..::|.:..|.:...||:|....|....::..|...|
 Worm   559 PADRTNFLQS---PAMV-------NAWYQPERNSITFPYAAWNPPYYNLNYPQAYNFAGQGGTGG 613

  Fly   467 HELSHGFDSEGMTFSSHG--------------VGSSAVDRELDRNPRFQQELGCLRRRFGR---- 513
            |||:||:|.||:.|..:|              ..||:...::.:....|....|...:.|.    
 Worm   614 HELTHGYDDEGVQFGFNGELTDCSWNKCGWMDTNSSSGFIDMAQCVVTQFSTQCCPEKTGNIHCA 678

  Fly   514 ----KRYEKFADASGLELAYSAYFDTAQTDHKRNRSAE----ELVTQKQQFFHNFAQFFC---SD 567
                .:.|..||..|.:.||.:|.....|..|......    |..|..|.|:..:...:|   ||
 Worm   679 NGATTQGENIADLGGQQAAYRSYRQYVATTRKGVEEDRLPGLENYTPNQIFWITYGYSWCMKQSD 743

  Fly   568 KEL---LQAHDHGSDRKRVNDAVAHFEPFREAFSC------GPSPRRRQCRLY 611
            ..|   |..:.|...:.|.|..:.....|.:.|.|      .|.|..| |:::
 Worm   744 ANLVHQLLTNPHSPAQCRTNQVMQDIPEFGKDFGCVRGSPMYPEPSGR-CKVW 795

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frmaNP_572226.2 GluZincin 25..601 CDD:472708 122/678 (18%)
nep-22NP_509528.1 M13 83..793 CDD:341056 129/699 (18%)

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