DRSC/TRiP Functional Genomics Resources

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Protein Alignment frma and nep-21

DIOPT Version :9

Sequence 1:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_001360525.1 Gene:nep-21 / 179925 WormBaseID:WBGene00011794 Length:864 Species:Caenorhabditis elegans


Alignment Length:761 Identity:142/761 - (18%)
Similarity:267/761 - (35%) Gaps:237/761 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 IVGLLVVQVKSHPQADPCQNFYKVACGNWSAS----------HATDSYESFMDRLDYNYQEKLAD 65
            :.|.|...:.|  :.:||::||:.||||:..:          |.....:|.:::       ::..
 Worm   181 LAGFLAENLNS--KINPCEDFYEFACGNYGLNKNLPANKPLRHTISDVQSRLNK-------QVKS 236

  Fly    66 LLDNEREDDEPHFLQQLRNFYTACRKPLSQDQV-------LRILEHLI----VMENIQNEELSVG 119
            :|.:....:|..:.:..:.:|..|   |.::::       :|.:...|    .:|..:.:|.|..
 Worm   237 MLQSPISANEKPWDKVAKGYYQKC---LDEEELESTGVEAMRDIAKRIGGWPTLEGDKWQEWSHS 298

  Fly   120 LTAAFRLQVLIDLNDSNTYDIWKQLMSHRKHWDPNTTNREPLTREMFDKLWASLPKIPF------ 178
            ...  ::.::::|...|.. |.:..::|    ||:.::|..:  |:....|.:..:.|:      
 Worm   299 WEE--QIALVLNLTGVNAV-ILEMAVTH----DPSNSSRSVI--ELDQPKWGAGSRYPYLSGAND 354

  Fly   179 PFKEYY---------------------WRELSELEEKIMSYGSEDDGFDSGDLVTRIP------- 215
            |....|                     ..|..|.|.|:::       |.:.|:|.|.|       
 Worm   355 PMLRNYTTLMKMTAVALGADPAIAEKEMNEAMEFELKLVN-------FSADDMVRRDPERGNNRF 412

  Fly   216 PFWMM----PW------------------PNGNITYENLSQ---MAHWLDIKANEFILTYIYMRL 255
            ..|.:    |:                  ||..:....:..   :.|.|.......:..||..||
 Worm   413 ELWQLKSVFPFINFEKYLKTVFKELVALSPNHTVIVREIDYFVGIQHVLQSTPKRVLANYISWRL 477

  Fly   256 KLVAEGVSTESWHI-----------------------------DR-DQCAEQSRQILSHPAAWL- 289
               .:|..|..:..                             || :.|...|..::..|...| 
 Worm   478 ---VQGGPTGDYFSFSPFLPPSAREPFYQFKANQTGMFNSPPPDRWEDCVTLSVIMMDMPVGRLF 539

  Fly   290 VEKNHPRLKEEPVLQDIFAELKQRFGQKLLANRNNFTRSTQHFL--LGKLKRMRLRLSILPRNSS 352
            ||....:.:....:.::.:.||..|.::|            |.|  :.::.|.|           
 Worm   540 VENFFEKERAMKKMTELTSYLKNEFIKQL------------HVLDWMDEITRRR----------- 581

  Fly   353 AQSMVRRIERH-------YRDVHMNAS--------DYFGNLHIGLNHSRSHKKYAQLWAIVFGRQ 402
            |.|....||..       :.|..|..:        :|.  ||:.:          ::..:.|..:
 Worm   582 AISKANMIEYKSGFPMVLFNDTWMEKNWGMIIKPREYL--LHLTI----------RVKLVRFTEE 634

  Fly   403 L--IPSRISKSDLY--PTQVRGYGTYASAFYIVKQNMLIVPLSLLEPPFYTHGQPSILTYSALGF 463
            |  :...:.:|..:  |.||       .|:|....|.:|.|..:::.||.|.|.|:.:||..:|.
 Worm   635 LLRLDQPLDRSMWFQSPAQV-------DAYYAPNNNEMIFPAGIMQFPFLTLGVPNYITYGMVGA 692

  Fly   464 ILGHELSHGFDSEGMTFSSHGVGSSAVDRELDRNPRFQQELGCLRRRFGRKRY------------ 516
            ::|||:||.||.:|..:...|..:...|.|.:.  :|.::..|..|::.....            
 Worm   693 VIGHEVSHAFDDQGGQYDEMGNLNDWWDAETEE--KFIEKTRCFVRQYENVHVVEADIHLNGQLS 755

  Fly   517 --EKFADASGLELAYSAYFDTAQTDHKRNRSAEEL-----VTQKQQFFHNFAQFFCS---DKELL 571
              |..||..|::.|::||  .|...:....|...|     .|.:|.||..:|..:||   .|..:
 Worm   756 LGENIADNGGVKTAFNAY--KAWKSNTTGISEPALPGFQNFTSQQMFFLAYANNWCSLVRPKHYI 818

  Fly   572 Q---AHDHGSDRKRVNDAVAHFEPFREAFSC---GPSPRRRQCRLY 611
            |   ...|...:.|....:.:...|.:||.|   .|....|:|:::
 Worm   819 QIILTDVHAPSKYRAMIPLQNRPEFAKAFQCPIGSPMNPERKCQVW 864

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frmaNP_572226.2 GluZincin 25..601 CDD:301352 136/735 (19%)
nep-21NP_001360525.1 M13 193..862 CDD:341056 138/743 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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