DRSC/TRiP Functional Genomics Resources

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Protein Alignment frma and nep-26

DIOPT Version :9

Sequence 1:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_001022540.1 Gene:nep-26 / 174593 WormBaseID:WBGene00014171 Length:807 Species:Caenorhabditis elegans


Alignment Length:717 Identity:156/717 - (21%)
Similarity:256/717 - (35%) Gaps:192/717 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 DPCQNFYKVACGNW---SASHATDS----YESFMDRLDYNYQ--EKLAD----LLDNEREDDEPH 77
            :||.|||:.|||.|   |.:...||    ||:.....|...|  .|:.|    |..|..|     
 Worm   125 EPCDNFYQFACGGWINQSVNLKYDSWNTLYETQRTAHDQIVQAMHKINDGSYPLPTNAGE----- 184

  Fly    78 FLQQLRNFYTACRKPLSQDQV-LRILEHLI-----VMENIQNEELSVGLTAAFRLQVLIDLNDSN 136
              :.....|..|....:.:|. |.:.|..:     .|..::|..|.  ...:|.:::..|.....
 Worm   185 --RAAAKMYEQCMDTDTLEQTGLHLWERFVDELGGWMPELKNGALE--QEESFEIELDEDEKKRR 245

  Fly   137 TYDIWKQLMSHRKH------W---DPNTTNREPLTREMFDKLWASLPKIPFPFKEYYWRELSELE 192
            .::|...::|...:      |   :.|..|    ::|....::..||.:..|.|.:|.:||:   
 Worm   246 RFEIEDIILSAFNYSVFPLFWAGVEVNYLN----SKEHLITIYEQLPILLAPEKYHYNKELT--- 303

  Fly   193 EKIMSYGSEDD------------------GFDSGDLVTRIPPFWMMPWPNGNITYENLSQMAHWL 239
             ..|.||..:.                  ||||.|...|     ||        ..|:..:.:.:
 Worm   304 -PEMIYGKMEGPPVTRALQQVGEELSAVLGFDSTDEKVR-----MM--------IANMIYLEYQI 354

  Fly   240 DIKANEFIL----TYIYMRLKLVAEGVSTESWHIDRDQCAEQSRQILSH--PAA------WLVEK 292
            .:..:.|..    .|..:.|:.:.|.....:||....:...::   |||  |.|      |:   
 Worm   355 TMAGSTFYKEKKERYTVVMLRELQEIAPAINWHYFLSRLVGEN---LSHSEPIALKTGTQWI--- 413

  Fly   293 NHPRLKEEPVLQDIFAELKQ-RFGQKLLAN------------------RNNFTRSTQHFLLGKLK 338
                    |:|..|..:||| |.|..:|.|                  |:...........|...
 Worm   414 --------PILSAIVEKLKQSRSGVAVLKNYVKWKTIMFHLAYASPKCRDGLLWMAVSLYSGAAS 470

  Fly   339 RMR----LRLS-ILP-----------------RNSSA-QSMVRRIERHY------------RDVH 368
            :.:    |||| |.|                 :|..| |::..||:..|            |:..
 Worm   471 QRKEFCVLRLSGIFPLSLPSILRKIDGIDHTEKNVKAVQNIADRIQEKYEEMVRSSNLFSDRETR 535

  Fly   369 MNASDYFGNL--HIGL-NHSRS----HKKYAQL-----WAIVFGRQLI-PSRISKSDLYPTQVRG 420
            .|..|...|:  .||. :..||    .|:..:|     |::|.|...: ..|:.:..| |...|.
 Worm   536 ENVIDKVNNMTKFIGFPDAMRSDYEMEKEAVRLHDTLFWSMVLGSSSVYKERLQRLRL-PVDPRS 599

  Fly   421 YGTYASAFYI----VKQNMLIVPLSLLEPPFYTHGQPSILTYSALGFILGHELSHGFDSEGMTFS 481
            :.....|..:    .::|::.:|...|..|:....|.....|:.:|.|:||||:|.||.:|   .
 Worm   600 WVDTRPAISVPAHNYERNLVQIPFDSLRLPYADEHQLDFANYAGIGTIIGHELTHAFDGQG---K 661

  Fly   482 SHG-VGSSAVDRELDRNPRFQQELGCLRRRFG------------RKRYEKFADASGLELAYSAYF 533
            .|| .|:..|....|....|:....|..:::.            ...||..||..||::||.|:.
 Worm   662 LHGPTGNLGVWWSTDSIREFKAREQCFVKQYAGLMDSHDMNAAKEGLYENIADQVGLKVAYEAWK 726

  Fly   534 DTAQTDHKRNRSAEELVTQKQQFFHNFAQFFCS-DKELLQAHDHGSDRKRVNDAVAHFEPFREAF 597
            .....:..|....|: .:|.|.||..:.|.:|: ..:..:...|..:|.|:..::.:...|..|:
 Worm   727 SNGNQNSGRMPGLEK-YSQDQLFFLAYTQGWCALRSKSYKLQPHMEERIRMLGSLQNSPEFASAW 790

  Fly   598 SC 599
            .|
 Worm   791 KC 792

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frmaNP_572226.2 GluZincin 25..601 CDD:301352 156/717 (22%)
nep-26NP_001022540.1 PepO 111..807 CDD:226118 156/717 (22%)
M13 124..805 CDD:189000 156/717 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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