DRSC/TRiP Functional Genomics Resources

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Protein Alignment frma and nep-5

DIOPT Version :10

Sequence 1:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_001364754.1 Gene:nep-5 / 173933 WormBaseID:WBGene00017393 Length:694 Species:Caenorhabditis elegans


Alignment Length:716 Identity:133/716 - (18%)
Similarity:254/716 - (35%) Gaps:247/716 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FKLRLLELIVGLLVVQVKSHPQADPCQNFYKVACGNWSASHATDSYESFMDRLDYNYQEKLADLL 67
            :...||||:          ....:||:||:...|..::.  ....:|..|..:  |.|||    .
 Worm   116 YSAELLELM----------DSSVNPCENFHHHVCNGFNP--RKKDFERLMKLI--NIQEK----P 162

  Fly    68 DNER---------------EDDEPHFLQQ-------------LRNFYTACRKPLSQDQ------- 97
            |:.:               :.:|.|.:.:             |.|.:|....|:|...       
 Worm   163 DHRKAVNVVRRMLSKCAMGKTEEIHQVGRLSSIILPGLPFPLLNNSWTKPSDPISTSNSSTTYSY 227

  Fly    98 --VLRILEHLIV----------MENIQNEELSVGLTAAFRLQVLIDLNDSNTYDIWKQLMSHRKH 150
              :.:||.|:|:          ::...:.|.|:.:...|. .||.:....|.|||.|      ::
 Worm   228 PFLTKILAHIILHNPDDAGFVGIKPSSDSEFSLFVVKPFS-PVLTNFKFRNMYDILK------RN 285

  Fly   151 WDPNTTN--------REPLTREMFD--KLWASLPKIPFPFKEYYWRELSELEEK--IMSYGSEDD 203
            ...::||        |:   |::.|  ||...|.||.|. .:.....|:|::.:  |:.:     
 Worm   286 APESSTNGMIDLEFDRQ---RQLNDVIKLQTKLEKIEFK-ADPEVVNLTEIQRQMPIIDW----- 341

  Fly   204 GFDSGDLVTRIPPFWMMPWPNGNITYENLSQ------MAHWLDIKA------NEFILTYIYMR-- 254
                    .|:...|:   |||   |.:|.:      .:::.:|.|      :|.|..::::|  
 Worm   342 --------KRLIDSWI---PNG---YAHLKEKVYGFNTSYYEEINAIISSTPSETIYNFLFLRFS 392

  Fly   255 LKLVAEGVSTESWHIDRDQCAEQSRQILSHPAAWLVEKNHPRLKEEP--------VLQDIFAELK 311
            .|.:...|:::.    .|.|..|....:  |...::..:     |||        :|..|..:||
 Worm   393 FKFLRTEVASDL----EDTCLHQLSTTI--PGKIVLYGS-----EEPEALNLLNGMLHTIKDQLK 446

  Fly   312 QRFGQ-KLLANRN--------NFTRSTQHF--------LLGKLKRMRLRLSILPRNSSAQSMVRR 359
            :.... |.:.:|.        |.|::...|        |:||         |.|.::...::...
 Worm   447 RSLATLKWMDSRGIEEAQKKFNKTKTVFGFTGEDLIDELVGK---------ITPESNYISTLQNV 502

  Fly   360 IERHYRDVHMNASDYFGNLHIGLNHSRSHKKYAQLWAIVFGRQLIPSRISKSDLYPTQVRGYGTY 424
            :....|::..:.::  .|:.:.||                                         
 Worm   503 LLWQTRNMFKSVAE--NNVTVFLN----------------------------------------- 524

  Fly   425 ASAFYIVKQNMLIVPLSLLEPPFYTHGQPSILTYSALGFILGHELSHGFDSEGMTFSSHGVGSSA 489
            :..||.|::|.:.:..:||..||.:...|:...::.:...:..::.|.||..|..:.|.|...:.
 Worm   525 SEVFYSVEKNEITISRALLHYPFMSANLPNYTNFATIASKILPQMIHIFDERGRFYDSDGNHRNW 589

  Fly   490 VDRELDRNPRFQQELGC----LRRRFGRKRYEKFADASGLELAYSAYFDTAQ---TDHKRNRSAE 547
            .:.|.:|  .||..:.|    ::..||          ..:.:.::||..|.:   |.....:|::
 Worm   590 WNTETER--YFQIIVQCFDGMMQNVFG----------VSVSIGWNAYDSTKEPYATLPGIQQSSD 642

  Fly   548 ELVTQKQQFFHNFAQFFCSDKELLQAHDHGSDRKRVNDAVAHFEPFREAFSCGPSPRRR---QCR 609
            |.:     ||::..:..|:           ||...||:|:|....|..||.|....:..   :|:
 Worm   643 EAL-----FFYSMVKTMCT-----------SDPDNVNEALASVPQFNSAFKCNNGTKMNPPTKCK 691

  Fly   610 L 610
            |
 Worm   692 L 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frmaNP_572226.2 GluZincin 25..601 CDD:472708 127/680 (19%)
nep-5NP_001364754.1 GluZincin 128..691 CDD:472708 127/691 (18%)

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