DRSC/TRiP Functional Genomics Resources

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Protein Alignment frma and nep-9

DIOPT Version :9

Sequence 1:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster
Sequence 2:NP_494531.2 Gene:nep-9 / 173683 WormBaseID:WBGene00017554 Length:700 Species:Caenorhabditis elegans


Alignment Length:744 Identity:143/744 - (19%)
Similarity:254/744 - (34%) Gaps:260/744 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLVVQVKSHPQ--ADPCQNFYKVACGNWSASHATDSYESFMDRLDYNYQEKLADLLDNEREDDEP 76
            :|..::|::..  ...|::|||..|.|:....|                      ||..|:    
 Worm    71 ILAQELKAYSDTATKSCEDFYKATCENYKDHQA----------------------LDRHRD---- 109

  Fly    77 HFLQQLRNFYTACRKPLSQDQVLRILEHLIVMENIQNEELSVGLTAAFRLQVLI----DLNDSNT 137
                        |:|..:.::::|..        :|.:|.:....:...::::.    :|:.:.:
 Worm   110 ------------CKKRKAVNKLVRGF--------LQRDESTFTSESESAIKLIFGKCDELSRNTS 154

  Fly   138 Y-DIWKQLMSHRKHWDPNTTNREPLTREMFDKLWASLPKI-PFPFKEYYWRE----LSELEEKIM 196
            | ||:|                             .:.|| .:|..|:.|::    |.::..|::
 Worm   155 YLDIFK-----------------------------DIKKIGSWPVLEHNWKDSMFNLDDVIAKLV 190

  Fly   197 SYGSEDDGFDSGDLVTRIPPFWMMPWPNGNITY---ENLSQMAHWLD------IKAN-------- 244
            ..||.|.|....:|  |...|       |:...   ....|..|.|:      :|||        
 Worm   191 KLGSTDFGLFKLEL--RKLAF-------GHFAVFVSSKQEQNIHQLEKTILGILKANGIQQDRKE 246

  Fly   245 ----------------EFILTYIYMRLKLVAE------GVST-------ESWHIDRDQCAEQSRQ 280
                            ||.....|:..:|.|.      |:|:       :|..:|......| |.
 Worm   247 LSDDLKDYSDFKNHLKEFYQEETYIEYRLYAGSIVENLGISSLTTQMALKSTGLDVFNHVNQ-RT 310

  Fly   281 ILSHPAAWLVEKNHPRLKEEPVLQDIFAELKQRFGQKLLAN-------------RNNFTRSTQHF 332
            ::::.:.:..|:|:            ...:.|:..::.|||             ..|.|::.:..
 Worm   311 LITNSSLFFGEENN------------LGMIIQKTPKRTLANFLIFHFIDVMTTDLANATKACKET 363

  Fly   333 LLGKLKRMRLRLSILPRN-----------SSAQSMVRRIERHYRDVHMNASDYFGNLHIGLNHSR 386
            |:..|.|..::  :|.||           ..||.:..:|..     .::.|.:|...|:..:...
 Worm   364 LIDLLPRASIQ--VLSRNFVNEDAQDDMVKMAQDLKTKITE-----MIDNSPFFTKFHLVFDAEE 421

  Fly   387 SHKKYAQLWAI---------VFGR-----QLIPS-----RISK--------------SDLYPTQV 418
            ..|...::.||         |..|     .|.||     .|.|              .||.||..
 Worm   422 QKKLIQKVKAIGIVTEYPQEVLDRDFERLNLTPSDSIYRTIQKLRRLRSEQLIEHLGGDLDPTDT 486

  Fly   419 RGYGTYASAFYIVKQNMLIVPLSLLEPPFYTHGQPSILTYSALGFILGHELSHGFDSEGMTFSSH 483
            |.:|   ||.|....|.|.:...:::.|::....|:.:....:|||||.||....||..:.....
 Worm   487 RVWG---SAHYDQTTNNLTIFAPIIDGPYFDTSYPNYVNQFLMGFILGRELGRSLDSVRIRKDEK 548

  Fly   484 GVGSSAVDRELDRNPRFQQELGCLRRRFGRK----------------RY---EKFADASGLELAY 529
            |...:.:..|..:  ||.:.|.|...::.:.                ||   |.|||..|.|.::
 Worm   549 GQTENWLKPESLK--RFDEHLKCWAEKYDKSADPLKSESKGIRQIEGRYIQNEMFADFIGHEASW 611

  Fly   530 SAYFDTAQTDHKRNRSAE--ELVTQKQQFFHNFAQFFC------SDKELLQAHDHGSDRKRVNDA 586
            .|:.   :.|.|.....|  :::..::.||:..|.:||      :|....|.| |.....|||.|
 Worm   612 RAFM---KLDVKNEEVLETFKVIKLRRMFFNVQALYFCRPPSGSTDWLSYQEH-HQHYSFRVNGA 672

  Fly   587 VAHFEPFREAFSCGP----SPRRRQCRLY 611
            ..:...|..||.|..    :|:.: |.::
 Worm   673 FKNMPQFALAFECASDDDMNPQNK-CSMF 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frmaNP_572226.2 GluZincin 25..601 CDD:301352 139/715 (19%)
nep-9NP_494531.2 M13 87..698 CDD:189000 140/724 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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