DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment frma and ece2

DIOPT Version :9

Sequence 1:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster
Sequence 2:XP_002935189.1 Gene:ece2 / 100488407 XenbaseID:XB-GENE-1011916 Length:766 Species:Xenopus tropicalis


Alignment Length:694 Identity:142/694 - (20%)
Similarity:251/694 - (36%) Gaps:178/694 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 DPCQNFYKVACGNWSASH----ATDSYESFMDRLDYNYQEKLADLLDNEREDDEPHFLQQLRNFY 86
            ||||:||:.:||.|...:    ....:.:|....|.| |..|..:|:|...:.......:.:.||
 Frog   116 DPCQDFYQYSCGGWMRRNPLPDGRSRWNTFNSIWDQN-QAILKHILENATFNSSSEAEMKTQRFY 179

  Fly    87 TACRK-----PLSQDQVLRILEHL---IVMENIQNEE-LSVGLTAA--------FRLQVLIDLND 134
            .:|.|     .|.|..:..::|.:   .:..|.:.|. :||..|.:        |.:.|..|...
 Frog   180 LSCLKEQRIEELRQKPLTDLIEKIGGWNISGNWRGENFMSVLKTVSGTYRATPFFSVFVSADSKS 244

  Fly   135 SNT----YDIWKQLMSHRKHWDPNTTNREPLTREM--------------------------FDKL 169
            ||:    .|.....:..|.::...|.|.:.|...:                          |:.|
 Frog   245 SNSNIIQVDQSGLFLPSRDYYLNKTANGKVLDAYLQYMVSVGELLGGSPGSVDMQMTQILEFETL 309

  Fly   170 WASLPKIP-------------------------FPFKEYYWRELSELE----EKIMSYGSEDDGF 205
            .|:| .:|                         |.:.:|....||.|:    |.::.||.|   :
 Frog   310 LANL-TVPQDERRDEEKIYNRMTISELQSLAPAFDWMDYLTFALSPLDLNDTEPVVVYGKE---Y 370

  Fly   206 --DSGDLVTRIPPFWMMPWPNGNITYENLSQMAHWLDI---KANEFILTYIYMRLKLVAEGVSTE 265
              ...:||....|..:    |..:.:..:.:|:..||.   ||.:.:|..:|     .|:...|.
 Frog   371 LQQVSELVNNTDPMLL----NNYLVWNLVQKMSSSLDSRFEKAQDKLLESLY-----GAKKSCTP 426

  Fly   266 SWHIDRDQCAEQSRQILSHPAAWLVEKNHPRLKEEPVLQDIFAELKQRFGQKLLANRNNFTRSTQ 330
            .|    ..|...:...|......|..|:......:.:.:.:.:|::..|                
 Frog   427 RW----QTCLSNTDDTLGFALGSLFVKSTFDKNSKNIAEQMISEIRDAF---------------- 471

  Fly   331 HFLLGKLKRM--RLRLSILPRNSSAQSMV---------RRIERHYRDVHMNASDYFGNLHIGLNH 384
            ...||.|..|  :.|.:...:..:...|:         :.::..|....::...:|.|:....|.
 Frog   472 ELTLGGLTWMDEKTRRAAKEKADAIYDMIGFPDFILDTKELDEVYDGFEVSEDAFFQNMLNFYNF 536

  Fly   385 SRSHKKYAQLWAIVFGRQL-IPSRISKSDLYPTQVRGYGTYASAFYIVKQNMLIVPLSLLEPPFY 448
            |      |:|.|    .|| .|....:..:.|..|       :|:|:..:|.::.|..:|:.|||
 Frog   537 S------AKLMA----EQLRKPPNREQWSMTPQTV-------NAYYLPNKNEIVFPAGILQAPFY 584

  Fly   449 THGQPSILTYSALGFILGHELSHGFDSEGMTFSSHG-----VGSSAVDRELDRNPRFQQELGCLR 508
            ....|..|.:..:|.::||||:|.||.:|..:...|     ..:|:::       .|:....|:.
 Frog   585 APTHPKALNFGGIGVVMGHELTHAFDDQGREYDEDGNLRPWWQNSSLE-------AFKNRTECMV 642

  Fly   509 RRF-----------GRKRY-EKFADASGLELAYSAYFDTAQTDHKRNRSAEELVTQKQQFFHNFA 561
            .::           ||:.. |..||..||:.||.||........:..:.....:|..|.||..||
 Frog   643 NQYNSYTVNGERVNGRQTLGENIADNGGLKAAYHAYKSWLVKHGEEKQLPGVGLTNNQLFFVGFA 707

  Fly   562 QFFCSDKELLQAHD------HGSDRKRVNDAVAHFEPFREAFSC 599
            |.:||.:....:|:      |...:.||...:::.:.|.|.|:|
 Frog   708 QVWCSVRTPESSHEGLVTDPHSPAKFRVIGTLSNSKDFAEHFNC 751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frmaNP_572226.2 GluZincin 25..601 CDD:301352 142/694 (20%)
ece2XP_002935189.1 M13 115..763 CDD:341056 142/694 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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