DRSC/TRiP Functional Genomics Resources

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Protein Alignment frma and mmel1

DIOPT Version :10

Sequence 1:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster
Sequence 2:XP_012821551.1 Gene:mmel1 / 100145721 XenbaseID:XB-GENE-991673 Length:765 Species:Xenopus tropicalis


Alignment Length:768 Identity:154/768 - (20%)
Similarity:259/768 - (33%) Gaps:216/768 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LRLLELIVGLLVVQVKSH----------------------PQADPCQNFYKVACGNWSASHA--- 44
            |.|:...|..|:|...||                      |..:||.:||:.|||.|...|.   
 Frog    53 LFLMTCAVVALLVLYTSHKESICTTTGCVTAAARIIQNMDPTIEPCTDFYQYACGGWLNKHVIPE 117

  Fly    45 TDSYESFMDRLDYNYQEKLADLLDNEREDDEPHFLQQLRNFYTACRKP--LSQDQVLRILEHLIV 107
            |.|..|..|.|....:..|..||:...::|...| ::.:..|.:|...  :.|...|.:||.|..
 Frog   118 TSSRYSIFDILRDEMEIILKGLLEMPDQEDRDAF-KKAKILYKSCMNESLIEQRDSLPLLELLTT 181

  Fly   108 M---------------ENIQNEELSVGLTAAFRLQVLIDLNDSNTYDIWKQLMSHRKHWDPNTTN 157
            :               .|...||....|...|..:||:|:      .:|.......||       
 Frog   182 VGEWPVASTDWNGTKESNWSLEEKLSLLNYKFNKRVLVDI------FVWNDDRESSKH------- 233

  Fly   158 REPLTREMFDKLWASLPKIPFPFKEYYWRE--LSELEEKIMSYG-------------SEDDGFDS 207
                      .::...|.:..|.::||:.:  ...:.|..:.:.             :.||....
 Frog   234 ----------IIYIDQPSLGMPSRDYYFNKGNYQRIREAYLQFMITIARMVREDRNLTRDDSLVQ 288

  Fly   208 G------DLVTRIPPFWMMPWPNGNIT--YENLSQMA----------HW------------LDIK 242
            .      ||.|.|...........::|  |..::.:.          :|            :.::
 Frog   289 EEMTRVMDLETDIARATAPSEERNDVTLLYNKMTLLEFQQKFALDDFNWTSFIQGVMSSVNIQLQ 353

  Fly   243 ANEFILTY--IYM-RLKLVAEGVSTES------WHIDRDQCAEQSRQILS--------------H 284
            |.|.::.|  .|: :||.:....|..:      |.:..|:.:..||:...              .
 Frog   354 AEEEVVVYGAPYLHQLKNILSNYSASTLQNYVVWRMVIDRVSSLSRRYKDARASYRKALYGTTLE 418

  Fly   285 PAAW-----LVEKNHPRLKEEPVLQDIFA-ELKQRFGQKLLANRNNFTRSTQHFL----LGKLKR 339
            .|.|     .|..|.........:::.|| |.|:.....:...|..|..:.....    ..|.|.
 Frog   419 EARWRECVSYVNSNMENAVGAMYVKETFAGESKRMISDLINKVREAFIETLDELQWMDETSKDKA 483

  Fly   340 MRLRLSILPRNSSAQSMVR----RIERHYRDVHMNASDYFGNLHIGLNH--SRSHKKYAQ----- 393
            ....|||..:......::.    ::::....::.:...||.|:...||.  .:|.||..:     
 Frog   484 REKALSIKEQIGYPDYILEDQNDKLDQETAALNFSEYQYFENILEILNSGAQKSLKKLREPVDQD 548

  Fly   394 LWAIVFGRQLIPSRISKSDLYPTQVRGYGTYASAFYIVKQNMLIVPLSLLEPPFYTHGQPSILTY 458
            .|.|                       ....|.|||...:|.::.|..:|:|||:...||..|.:
 Frog   549 AWII-----------------------GAAVADAFYSPNRNQIVFPAGILQPPFFNKHQPQALNF 590

  Fly   459 SALGFILGHELSHGFDSEGMTFSSHG------VGSSAVDRELDRNPRFQQELGCLRRRFGRKRY- 516
            ..:|.::|||::||||..|..|...|      ...||:        .|:.:..|:..::|...: 
 Frog   591 GGIGMVIGHEITHGFDDNGRNFDKDGNMFDWWSNFSAM--------HFKDQSRCMVYQYGNYTWE 647

  Fly   517 --------------EKFADASGLELAYSAYFDTAQTDHKRNRSAEELVTQKQQFFHNFAQFFCSD 567
                          |..||..|:..||.||....:...|..:.....:|.||.||.||||.:|..
 Frog   648 LAGGQNVSGIITLGENIADNGGVRQAYKAYLKWVERHGKEPKLPGLDLTYKQLFFLNFAQVWCGS 712

  Fly   568 ------KELLQAHDHGSDRKRVNDAVAHFEPFREAFSCGPSPRR---RQCRLY 611
                  :..::...|...:.||..::.:||.|.|.|:|....:.   .:||::
 Frog   713 YRPEYARHSIKTDVHSPFKYRVMGSLQNFEAFAEEFNCKKGTKMHPVEKCRVW 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frmaNP_572226.2 GluZincin 25..601 CDD:472708 144/711 (20%)
mmel1XP_012821551.1 M13 95..763 CDD:341056 144/722 (20%)

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