DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPR and gpr139

DIOPT Version :9

Sequence 1:NP_001368972.1 Gene:SPR / 31463 FlyBaseID:FBgn0029768 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001352082.1 Gene:gpr139 / 798482 ZFINID:ZDB-GENE-050823-2 Length:363 Species:Danio rerio


Alignment Length:382 Identity:82/382 - (21%)
Similarity:149/382 - (39%) Gaps:94/382 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 LLIITIISNSLIVLVLSK---KSMATPTNFVLMGMAICDMLTVIF---------------PAPGL 145
            ||.:.:.:|.|.|::||:   :...:..|: |:.:|:.|:|.::.               |.|  
Zfish    35 LLCLGLPANILTVIILSQLVLRRQKSSYNY-LLALAVADILVLLLIVFVDFLLEDFILGAPLP-- 96

  Fly   146 WYMYTFGNHYKPLHPVSMCLAYSIFNEIMPAMCHTISVWLTLALAVQRYIYVCHAPMARTWCTMP 210
                         |.::..:....|:.|     || |:|:|:.|.:.|||.|||.....|.....
Zfish    97 -------------HSLNKAVQVLEFSSI-----HT-SIWITVPLTIDRYIAVCHPLRYHTVSYPA 142

  Fly   211 RVRRCTAYIALLAFLHQLPRFFDRTYMPLVIEWNGSP-------TEVCHLETSMWVHDYIGVDLY 268
            |.|:....:.....:..:|.:    :.|.:  |:|.|       :........:|||        
Zfish   143 RTRKVILAVYAGCLISSVPYY----WWPEL--WHGLPGASPGGRSSSAGQHVLVWVH-------- 193

  Fly   269 YTSYYLFRVLFVHLLPCIILVTLNILLFAAMRQAQERRKLLFRENRKKECKKLR--ETNCTTLML 331
                    ...|:||||.:..:||.::.         |||..|    :.|.:||  .|..||.:|
Zfish   194 --------CATVYLLPCSVFFSLNAIIV---------RKLRCR----RSCFRLRGYSTGKTTAIL 237

  Fly   332 IVVVSVFLLAEIPIAVVTAMHIVSSLIIEFLDYGLANICIMLT---NFFLVFSYPINFGIYCGMS 393
            :.:.|||.:...|..::...|:.:   ::....|.|.:..::|   |...:.:..:||.:||.:|
Zfish   238 LAITSVFAVLWAPRTLMILYHLYT---VQPAMPGPARLLHLVTDVANMLALLNTGVNFFLYCFIS 299

  Fly   394 RQFRETFKEIFLGRLMAKKDSSTKYSIVNGART----CTNTNETVLXXLVMLVPRRG 446
            ::||.....:.......:|.....|:..|.:.|    .:..|...:..||....:.|
Zfish   300 KRFRRMAGTVLKAFFRCRKQPPPFYASHNFSITSSPWISPANSHCIKMLVYQYDKNG 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPRNP_001368972.1 7tmA_FMRFamide_R-like 90..400 CDD:410630 74/330 (22%)
TM helix 1 92..116 CDD:410630 6/16 (38%)
TM helix 2 124..146 CDD:410630 7/36 (19%)
TM helix 3 169..191 CDD:410630 8/21 (38%)
TM helix 4 214..230 CDD:410630 0/15 (0%)
TM helix 5 270..293 CDD:410630 6/22 (27%)
TM helix 6 328..353 CDD:410630 6/24 (25%)
TM helix 7 368..393 CDD:410630 6/27 (22%)
gpr139NP_001352082.1 7tmA_GPR139 28..306 CDD:320585 74/330 (22%)
TM helix 1 28..53 CDD:320585 7/17 (41%)
TM helix 2 61..86 CDD:320585 5/25 (20%)
TM helix 3 100..130 CDD:320585 11/35 (31%)
TM helix 4 142..162 CDD:320585 2/19 (11%)
TM helix 5 186..211 CDD:320585 10/40 (25%)
TM helix 6 228..260 CDD:320585 9/31 (29%)
TM helix 7 274..299 CDD:320585 6/24 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593675
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8429
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.930

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