DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPR and valopa

DIOPT Version :9

Sequence 1:NP_001368972.1 Gene:SPR / 31463 FlyBaseID:FBgn0029768 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_571661.1 Gene:valopa / 58109 ZFINID:ZDB-GENE-000427-4 Length:377 Species:Danio rerio


Alignment Length:429 Identity:83/429 - (19%)
Similarity:158/429 - (36%) Gaps:130/429 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 SPLE--YAMPL-------YGYCMPFLLIITIIS---NSLIVLVLSK-KSMATPTNFVLMGMAICD 134
            ||.|  ::.||       |......:.::|.:|   |..::||..: :.:..|.|::::.:::.|
Zfish    12 SPAEDPFSAPLSSIAPWNYSVLAALMFVVTALSLSENFTVMLVTFRFQQLRQPLNYIIVNLSLAD 76

  Fly   135 MLTVIFPAP-------------GLWYMYTFGNHYKPLHPVSMCLAYSIFNEIMPAMCHTISVWLT 186
            .|..:....             |.|.....|            .|.:.|.        .:::|..
Zfish    77 FLVSLTGGSISFLTNYHGYFFLGKWACVLEG------------FAVTFFG--------IVALWSL 121

  Fly   187 LALAVQRYIYVCHAPMARTWCTMPRVRRCTAYIALL-----AFLHQLPRFFDRTYMPLVIEWNGS 246
            ..||.:|:..:|. |:...     |:|...|.:.|:     :|:..:|.         |:.|  |
Zfish   122 AVLAFERFFVICR-PLGNI-----RLRGKHAALGLVFVWSFSFIWTVPP---------VLGW--S 169

  Fly   247 PTEVCHLETSM---W----VHDYIGVDLYYTSYYLFRVLFVHLLPCIILVTLNILLFAAMRQAQE 304
            ...|..:.|:.   |    .||:..:...:::.::|              .|.:::....:..::
Zfish   170 SYTVSRIGTTCEPNWYSGNFHDHTFIITLFSTCFIF--------------PLGVIIVCYCKLIRK 220

  Fly   305 RRKLLFRENRKKECKKLRETNCTTLMLIVVVSVFLLAEIPIA----VVTA---MHIVSSLIIEFL 362
            .||:.....|....:|....  .|.|::|::..|::|..|.|    ::||   ||:         
Zfish   221 LRKVSNTHGRLGNARKPERQ--VTRMVVVMIVAFMVAWTPYAAFSIIITAHPSMHV--------- 274

  Fly   363 DYGLANICIMLTNFFLVFSYPINFGIYCGMSRQFRETFKEIFLGRLMAKKDSSTKYSIVNGARTC 427
            |..||.|...:.....|:: ||   ||..|::|||:...::.         |.:|.::|.|....
Zfish   275 DPRLAAIPAFVAKTAAVYN-PI---IYVFMNKQFRKCLVQLL---------SCSKVTVVEGNNNQ 326

  Fly   428 T----------NTNETVLXXLVMLVPRRGSSDHRRSSTS 456
            |          ||.|.......:.||:...:...||:.|
Zfish   327 TTERAGMTSGSNTGEMSAIAARVSVPKTEENPGDRSTFS 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPRNP_001368972.1 7tmA_FMRFamide_R-like 90..400 CDD:410630 67/352 (19%)
TM helix 1 92..116 CDD:410630 6/26 (23%)
TM helix 2 124..146 CDD:410630 4/34 (12%)
TM helix 3 169..191 CDD:410630 3/21 (14%)
TM helix 4 214..230 CDD:410630 3/20 (15%)
TM helix 5 270..293 CDD:410630 2/22 (9%)
TM helix 6 328..353 CDD:410630 10/31 (32%)
TM helix 7 368..393 CDD:410630 6/24 (25%)
valopaNP_571661.1 7tm_1 47..297 CDD:278431 56/315 (18%)
7tm_4 <95..314 CDD:304433 55/293 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X120
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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