DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SPR and gper1

DIOPT Version :9

Sequence 1:NP_001368972.1 Gene:SPR / 31463 FlyBaseID:FBgn0029768 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001122195.1 Gene:gper1 / 565271 ZFINID:ZDB-GENE-090311-1 Length:353 Species:Danio rerio


Alignment Length:397 Identity:86/397 - (21%)
Similarity:152/397 - (38%) Gaps:86/397 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 DNNISYWNLTCDSPLEYAMPLYGYCM--PFLLIITIISNSLIVLV-LSKKSMATPTNFVLMGMAI 132
            |.||:....:.|:...|.:.|:..|:  .||..|..|.|.||::| |:.:...|..:...:.:|:
Zfish    24 DFNITDVKESTDTYEFYIIGLFLSCLYTIFLFPIGFIGNILILVVNLNHRERMTIPDLYFVNLAV 88

  Fly   133 CDMLTVIFPAPGLWYMYTFGNHYKPLHPVSMCLAYSIFNEIMPAMCHTISVWLTLALAVQRYIYV 197
            .|::.|   |..|..::.....|         ..|::       :|    .:::|.|.|..|..:
Zfish    89 ADLILV---ADSLIEVFNLNEKY---------YDYAV-------LC----TFMSLFLQVNMYSSI 130

  Fly   198 CHAPMARTWCTMPRVRRCTAYIALLAFLHQLP-RFFDRTYMPLVIEWNGS------PTEVCHLET 255
                ...||.:..|      |:||.:.:...| |......:...:.|..|      |..:...:.
Zfish   131 ----FFLTWMSFDR------YVALTSSMSSSPLRTMQHAKLSCSLIWMASILATLLPFTIVQTQH 185

  Fly   256 SMWVHDYIGVDLYYTSYYLFRVLFVHLLPCIILVTLNILLFAAMRQAQERRKLLFRENRKKECKK 320
            :..|| :...:::...:  ..|....|:|..|:.....|:...:.:||:.:.|..|..     |.
Zfish   186 TGEVH-FCFANVFEIQW--LEVTIGFLIPFSIIGLCYSLIVRTLMRAQKHKGLWPRRQ-----KA 242

  Fly   321 LRETNCTTLMLIVVVSVFLLAEIPIAVVTAMHIVSSL--------IIEFLDYGLANICIMLTNFF 377
            ||       |::|||.||.:..:|..|..::.::...        ...:.||.|....:.|..|.
Zfish   243 LR-------MIVVVVLVFFICWLPENVFISIQLLQGTADPSKRTDTTLWHDYPLTGHIVNLAAFS 300

  Fly   378 LVFSYPINFGIYCGMSRQFRETFKEIFLGRLMAKKDSSTKYSIVNGARTCTNTNETVLXXLVMLV 442
            .....||   ||..:...||:..      ||..|:.:|  :|:|  .|.|.:|       |.:.:
Zfish   301 NSCLNPI---IYSFLGETFRDKL------RLFIKRKAS--WSVV--YRFCNHT-------LDLQI 345

  Fly   443 PRRGSSD 449
            |.|..|:
Zfish   346 PVRSESE 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPRNP_001368972.1 7tmA_FMRFamide_R-like 90..400 CDD:410630 68/327 (21%)
TM helix 1 92..116 CDD:410630 10/26 (38%)
TM helix 2 124..146 CDD:410630 4/21 (19%)
TM helix 3 169..191 CDD:410630 3/21 (14%)
TM helix 4 214..230 CDD:410630 4/16 (25%)
TM helix 5 270..293 CDD:410630 4/22 (18%)
TM helix 6 328..353 CDD:410630 8/24 (33%)
TM helix 7 368..393 CDD:410630 6/24 (25%)
gper1NP_001122195.1 7tm_1 61..309 CDD:278431 58/298 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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