DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPR and sprr-1

DIOPT Version :10

Sequence 1:NP_001368972.1 Gene:SPR / 31463 FlyBaseID:FBgn0029768 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_510555.2 Gene:sprr-1 / 3564903 WormBaseID:WBGene00010986 Length:527 Species:Caenorhabditis elegans


Alignment Length:401 Identity:126/401 - (31%)
Similarity:211/401 - (52%) Gaps:55/401 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 YWNLTCDS-------PLEYAMPLYGYCMPFLLIITIISNSLIVLVLSKKSMATPTNFVLMGMAIC 133
            |:|.||..       |:::|:|:|||.|||::.:|:.:||.||:|||.|.:.||||:||:.||:.
 Worm     9 YYNFTCRPVFIGIMVPVDWAVPMYGYMMPFIVTLTVATNSFIVVVLSHKYLRTPTNYVLLAMAVT 73

  Fly   134 DMLTVIFPAPGLWYMYTFGNHYKPLH---PVSMCLAYSIFNEIMPAMCHTISVWLTLALAVQRYI 195
            ::||.:...|...|.||...:...|.   |...|.........:|::.||:::|||:.||:||||
 Worm    74 ELLTGLSCLPWFTYYYTLSGYKNDLQTGLPSFWCDMIPYMAAFLPSIFHTMAIWLTVYLAIQRYI 138

  Fly   196 YVCHAPMARTWCTMPRVRRCTAYI---ALLAFLHQLPRFFDRTYMPLVIEWNGSPTEVCHLETSM 257
            |:|...:.|.:||:.|.::...:|   |.:.:...|..|.::::.....:.|.: .::|:...:.
 Worm   139 YICVPSLVRKFCTIHRSKQVIFFIISVATIMYTPDLMAFHNKSHDVFDSKRNRT-MKLCYRHRAP 202

  Fly   258 WVHDYIGVDLYYTSYYLFRVLFVHLLPCIILVTLNILLFAAMRQAQERRKLLF-------RENRK 315
            ::.. :|.|:||...:..:.:.|||:|.::||.....|..|:|.|..|...|.       |..|:
 Worm   203 FMLK-LGDDIYYKVMFTTQTVAVHLIPSVLLVIFTWKLVGAIRVADRRHANLLSKYSTTTRSTRR 266

  Fly   316 K----------------------------ECKKLRETNCTTLMLIVVVSVFLLAEIPIAVVTAMH 352
            |                            |.::.......|.||:||:.:||:.|||.|::..:|
 Worm   267 KFSELTNSSENENKITRLFKQRDSVSVGNEPRRAHGLKQNTRMLVVVILLFLITEIPAALIFTIH 331

  Fly   353 IVS-SLIIEFLDYGLANICIMLTNFFLVFSYPINFGIYCGMSRQFRETFKEIFLGRLMA----KK 412
            ::| ||...|:||...||.:::.|..:|.|||..|.||||||:|||:..:::|.|:::.    .|
 Worm   332 VLSVSLKFSFVDYQFLNILLIVRNVLIVVSYPFRFAIYCGMSQQFRDVVRQMFTGKMLTHAIRDK 396

  Fly   413 DSSTKYSIVNG 423
            |:||...:|.|
 Worm   397 DNSTTMQLVQG 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPRNP_001368972.1 7tmA_FMRFamide_R-like 90..400 CDD:410630 112/351 (32%)
TM helix 1 91..117 CDD:410630 14/25 (56%)
TM helix 2 123..148 CDD:410630 9/24 (38%)
TM helix 3 168..198 CDD:410630 13/29 (45%)
TM helix 4 210..230 CDD:410630 4/22 (18%)
TM helix 5 269..294 CDD:410630 7/24 (29%)
TM helix 6 322..355 CDD:410630 12/32 (38%)
TM helix 7 368..393 CDD:410630 12/24 (50%)
sprr-1NP_510555.2 7tmA_FMRFamide_R-like 30..380 CDD:410630 112/351 (32%)
TM helix 1 31..57 CDD:410630 14/25 (56%)
TM helix 2 63..88 CDD:410630 9/24 (38%)
TM helix 3 111..141 CDD:410630 13/29 (45%)
TM helix 4 153..175 CDD:410630 3/21 (14%)
TM helix 5 213..238 CDD:410630 7/24 (29%)
TM helix 6 265..331 CDD:410630 14/65 (22%)
TM helix 7 348..373 CDD:410630 12/24 (50%)

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