DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SPR and sprr-3

DIOPT Version :9

Sequence 1:NP_001368972.1 Gene:SPR / 31463 FlyBaseID:FBgn0029768 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_500218.2 Gene:sprr-3 / 190541 WormBaseID:WBGene00022086 Length:465 Species:Caenorhabditis elegans


Alignment Length:510 Identity:123/510 - (24%)
Similarity:216/510 - (42%) Gaps:101/510 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 EMELADPRQMVRGFHLPTNESQLEIPDYGNESLDYPNYQQMVGGPCRMEDNNISYWNLTCDSPLE 86
            ::|:.|       :...||..|....|||    .|..|.|.. .|.::    |.:.::..|..|:
 Worm     3 DLEICD-------YDETTNNRQNCTEDYG----VYDGYTQTC-VPLQL----IQFEDVENDVKLQ 51

  Fly    87 YAMPLYGYCMPFLLIITIISNSLIVLVLSKKSMATPTNFVLMGMAICDMLTVIFPAPGLWYMYTF 151
            .   :||..:|.|.::.::|||:::||||::.....:...|:.||||.:|..|.|.|...|.|..
 Worm    52 I---IYGIILPVLAVLVVVSNSVVILVLSQQKSKRASVEPLLWMAICSLLMAISPLPFTIYYYNL 113

  Fly   152 GNHYKPLHPVSMCLAYSIFNEIMPAMCHTISVWLTLALAVQRYIYVCHAPMARTWCTMPRVRRCT 216
            .:|......:.:|....:..||||...:.:.:..|:.|.|||:|.|.:...:..|||...|||.:
 Worm   114 SHHLDFNQTLFLCYLQKVCMEIMPFFFNNLVLLFTILLGVQRFIVVQYPLQSIRWCTPKMVRRYS 178

  Fly   217 AYIALLA-FLHQLPRFFD-RTYMPLVIEWNGSPTEVCHLETSMWV----------HDYIGVDLYY 269
            ..|.:|| ||......:| |......|::.         :.|.||          ....|.|.:.
 Worm   179 KLILILATFLTGFHSLYDIRLLYHFCIKYR---------DESFWVARCFIGYSSLTSAFGADAFS 234

  Fly   270 TSYYLFRVLFVHLLPCIILVTLNILLFAAMRQAQERRKLLFR-ENRKKECKKLRETNCTTLMLIV 333
            ..:..||:. ::||...:|..:.|||...:|.....::.:.| :|||....       ||:||.|
 Worm   235 ALFDYFRIT-INLLASGLLFVVTILLIQTIRTHDHPKQGVHRHKNRKTSAN-------TTIMLTV 291

  Fly   334 VVSVFLLAEIPIAVVTAMHIVSSLIIEFLDY-GLANICI-MLTNFFL-VFS-------YPINFGI 388
            ::.:::||.:|..::       .|:::.:|| .:..|.. ::.|.:| ||:       :||:|.|
 Worm   292 IIIIYMLARVPTTLL-------FLLVKLMDYISVPTIAFEVMNNIYLRVFANITTISLHPISFAI 349

  Fly   389 YCGMSRQFRETFKEIFLGRLMAKKDSSTKYSIVNGARTCTNTNETVLXXLVMLVPRRGSSDHRRS 453
            |..|||:||.:.:.:...|.:|..:....::                           ||....:
 Worm   350 YMFMSRKFRVSMRRLLGWRFLASDEEFNAFT---------------------------SSTRIHT 387

  Fly   454 STSTTTTTTTKTIG----GSMIIGGEASAQHQHLVTHHLQTHSQPSQQRRVSTMD 504
            :....|....::||    |:..:|.:....    |...:....:|.::||.:|.|
 Worm   388 AHPKMTLMEKESIGSSGKGTPSVGQKRGMS----VDFKISFDVEPQRRRRATTAD 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPRNP_001368972.1 7tmA_FMRFamide_R-like 90..400 CDD:410630 93/332 (28%)
TM helix 1 92..116 CDD:410630 10/23 (43%)
TM helix 2 124..146 CDD:410630 9/21 (43%)
TM helix 3 169..191 CDD:410630 6/21 (29%)
TM helix 4 214..230 CDD:410630 6/16 (38%)
TM helix 5 270..293 CDD:410630 5/22 (23%)
TM helix 6 328..353 CDD:410630 7/24 (29%)
TM helix 7 368..393 CDD:410630 10/33 (30%)
sprr-3NP_500218.2 7tm_GPCRs 89..358 CDD:391938 80/292 (27%)
TM helix 2 89..110 CDD:341315 9/20 (45%)
TM helix 3 128..160 CDD:341315 10/31 (32%)
TM helix 4 172..201 CDD:341315 10/28 (36%)
TM helix 5 234..258 CDD:341315 5/24 (21%)
TM helix 6 279..316 CDD:341315 12/50 (24%)
TM helix 7 329..354 CDD:341315 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166441
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D421120at33208
OrthoFinder 1 1.000 - - FOG0004530
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47023
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.040

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