DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPR and dmsr-5

DIOPT Version :9

Sequence 1:NP_001368972.1 Gene:SPR / 31463 FlyBaseID:FBgn0029768 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_499413.1 Gene:dmsr-5 / 190009 WormBaseID:WBGene00012962 Length:401 Species:Caenorhabditis elegans


Alignment Length:373 Identity:82/373 - (21%)
Similarity:157/373 - (42%) Gaps:90/373 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 LYGYCMPFLLIITIISNSLIVLVLSKKSMAT-PTNFVLMGMAICDMLTV-----------IFPAP 143
            |:.|...|:....::.|||...||::|:|.. ..|.:|..|:|||::|:           ||..|
 Worm    33 LHRYLCLFVCFFGVLLNSLHFYVLTRKAMRVYIINALLCAMSICDIITMTSYFIYILRFRIFDTP 97

  Fly   144 G--LWYMYTFGNHYKPLHPVSMCLAYSIFNEIMPAMCHTISVWLTLALAVQRYIYVCHAPMARTW 206
            .  :.|.|.:             |.:.|.:.......||.|::|::.:|..|:..:..  :...|
 Worm    98 STIIGYSYPW-------------LIFLITHVTSSIALHTTSLYLSVIMAYIRWTALDR--LDAKW 147

  Fly   207 CTMPRVRRCTAYIALLAFLHQLPRFFDRTYMPLVIEWNGSPTEVCHLETSMWVHDYI-------- 263
            .....:::...:.||:..:..:|.......:|:......:.|::  ||.:.:...|.        
 Worm   148 INHGALKQILIFTALIVSVISIPTVMVHKIVPVTEVLGMNETDL--LEGAKFDGLYTVQLDETKI 210

  Fly   264 -GVDLYYTSYYLFRVLFVHLLPCIILVTLNILLFAAMRQAQERRKLLFRENRK------------ 315
             |..|:..:.::..::| ..|||::::...|.|...:.|..|:||:|..|.|:            
 Worm   211 NGCALFRVNLWITGIMF-KALPCLLILWFTIALIYKLVQMSEKRKILRGEKRENVEFQLLATSAT 274

  Fly   316 ----------------KECKKLRETNCTTLMLIVVVSVFLLAEIP---IAVVTAM---HIVSSLI 358
                            .:|.:....:.||||||:::.|||..|:|   :::::|:   |:.:.:.
 Worm   275 PTTTTRNEASPRLRKVSQCSRNVSIDRTTLMLIIMLVVFLCTEMPQGLLSILSAIYPTHVHTMIY 339

  Fly   359 I---EFLDYGLANICIMLTNFFLVFSYPINFGIYCGMSRQFRETFKEI 403
            :   |.||  |.::...||:|.          :||.||..:|.|.|.:
 Worm   340 VNVGEVLD--LMSLINCLTSFI----------VYCVMSTTYRATVKSV 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPRNP_001368972.1 7tmA_FMRFamide_R-like 90..400 CDD:410630 80/368 (22%)
TM helix 1 92..116 CDD:410630 7/23 (30%)
TM helix 2 124..146 CDD:410630 10/34 (29%)
TM helix 3 169..191 CDD:410630 5/21 (24%)
TM helix 4 214..230 CDD:410630 2/15 (13%)
TM helix 5 270..293 CDD:410630 4/22 (18%)
TM helix 6 328..353 CDD:410630 11/30 (37%)
TM helix 7 368..393 CDD:410630 5/24 (21%)
dmsr-5NP_499413.1 7tmA_FMRFamide_R-like 32..372 CDD:320109 80/368 (22%)
TM helix 1 34..58 CDD:320109 7/23 (30%)
TM helix 2 67..89 CDD:320109 7/21 (33%)
TM helix 3 112..134 CDD:320109 5/21 (24%)
TM helix 4 155..171 CDD:320109 2/15 (13%)
TM helix 5 217..240 CDD:320109 4/23 (17%)
TM helix 6 300..325 CDD:320109 11/24 (46%)
TM helix 7 340..365 CDD:320109 9/36 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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