DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SPR and egl-6

DIOPT Version :9

Sequence 1:NP_001368972.1 Gene:SPR / 31463 FlyBaseID:FBgn0029768 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001257033.1 Gene:egl-6 / 183513 WormBaseID:WBGene00001175 Length:395 Species:Caenorhabditis elegans


Alignment Length:416 Identity:96/416 - (23%)
Similarity:167/416 - (40%) Gaps:112/416 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 RMEDNNISYWNLTCDSPLEYAMPLYGYCMPFLLIITII---SNSLIVLVLSKKSMATPTNFVLMG 129
            |....|:|...:|..|.|:|...::   :|..:.|.|.   ||...::||::|.|.||.|.:|.|
 Worm    12 RENATNVSSRAITDKSFLQYYDEIH---IPLSISICIFGAASNVFNIIVLTRKRMRTPINILLTG 73

  Fly   130 MAICDMLTVIFPAPGLWYMYTFGNHYKPLHPVSMCL---------AYSIFNEIMPAMCHTISVWL 185
            ::|...|...     .:::|....:|:     ..|:         .|..||..:..:.|||:...
 Worm    74 LSIAQWLLAT-----NYFLYLLLEYYR-----YQCVQLLWSEAFTRYRFFNVNLNTVFHTIAFTT 128

  Fly   186 TLALAVQRY------------IYVCHAPMART---WCTMPRVRRCTAYIALLAFLHQLPRFF--- 232
            |:.:||.||            ||.|...:|..   |..:|.:              .||.||   
 Worm   129 TIVVAVFRYCALKFPIQANRFIYKCQPAIAANVIIWIIIPII--------------SLPLFFISE 179

  Fly   233 ------DRTYMPLVIEWNGSPTEVCHLETSMWVHDYIGVDLYYTSYYLFRVLFVHLLPCIILVTL 291
                  |.....|..|..|...::.:.|:.:         |....::.|.::| .|||.:||..|
 Worm   180 VKIVARDHVAYDLQCEMEGPLYDLSYQESPL---------LVSAVFWAFGIVF-KLLPSLILSIL 234

  Fly   292 NILLFAAMRQAQERRKLLFR--------ENRKKECKKLRETNCTTLMLIVVVSVFLLAEIPIAVV 348
            .|.|..:::..:.|||...|        .:.:|..:||.....||.||::::.:.::.|:|:.::
 Worm   235 LIALIRSLKSVERRRKNWKRTQGANICTNSERKAKRKLTTRPRTTRMLVIILLLCVMVELPMGIL 299

  Fly   349 TAMHIVSSLIIEFLDYG----------LANICIMLTNFFLVFSYPINFGIYCGMSRQFRETFKEI 403
            .....:         ||          :.|:..|||   |::| .::|.:||.||.::..||:.:
 Worm   300 NLCVAI---------YGEEFGNRYYDPVGNLMEMLT---LLYS-SVSFVLYCTMSNEYLSTFRAL 351

  Fly   404 FLGRLMAKKDSSTKYSIVNGARTCTN 429
            |.        ..|:.:.:.|.|...|
 Worm   352 FF--------PWTRKNSLRGTRRSWN 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPRNP_001368972.1 7tmA_FMRFamide_R-like 90..400 CDD:410630 82/363 (23%)
TM helix 1 92..116 CDD:410630 7/26 (27%)
TM helix 2 124..146 CDD:410630 5/21 (24%)
TM helix 3 169..191 CDD:410630 6/21 (29%)
TM helix 4 214..230 CDD:410630 1/15 (7%)
TM helix 5 270..293 CDD:410630 8/22 (36%)
TM helix 6 328..353 CDD:410630 5/24 (21%)
TM helix 7 368..393 CDD:410630 9/24 (38%)
egl-6NP_001257033.1 7tmA_FMRFamide_R-like 35..348 CDD:320109 82/362 (23%)
TM helix 1 35..61 CDD:320109 7/28 (25%)
TM helix 2 67..92 CDD:320109 6/29 (21%)
TM helix 3 111..141 CDD:320109 10/29 (34%)
TM helix 4 154..174 CDD:320109 4/33 (12%)
TM helix 5 212..237 CDD:320109 8/25 (32%)
TM helix 6 273..303 CDD:320109 6/29 (21%)
TM helix 7 316..341 CDD:320109 9/28 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004530
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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