DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15784 and Crtac1

DIOPT Version :9

Sequence 1:NP_001284891.1 Gene:CG15784 / 31461 FlyBaseID:FBgn0029766 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_599228.2 Gene:Crtac1 / 171438 RGDID:621085 Length:646 Species:Rattus norvegicus


Alignment Length:138 Identity:36/138 - (26%)
Similarity:48/138 - (34%) Gaps:62/138 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 HKHGHG-------------PHHHGR----------------HGHHGRPHHHH----PHGH-HFGP 230
            |..|:|             ||.|||                :|:...||..:    .||. .|..
  Rat   270 HNQGNGTFVDAAASAGVDDPHQHGRGVALADFNRDGKVDIVYGNWNGPHRLYLQMSAHGKVRFRD 334

  Fly   231 HFGPHFGPHAGPSPF------DFDRRSFRGPWHDQ--SQFFQWMGLPWALDNAAANRRSHSLPRL 287
            ...|.|   :.|||.      |||        :||  ..||..:    |..:::|||    |.|:
  Rat   335 IASPKF---STPSPVRTVIAADFD--------NDQELEVFFNNI----AYRSSSANR----LFRV 380

  Fly   288 SRRDCRGD 295
            .||: .||
  Rat   381 IRRE-HGD 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15784NP_001284891.1 None
Crtac1NP_599228.2 VCBS 63..133 CDD:290251
VCBS 256..310 CDD:290251 8/39 (21%)
VCBS 300..364 CDD:290251 16/74 (22%)
UnbV_ASPIC 461..513 CDD:284917
EGF_CA 560..606 CDD:284955
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28HUS
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.