DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16756 and Lyc2

DIOPT Version :10

Sequence 1:NP_572222.2 Gene:CG16756 / 31460 FlyBaseID:FBgn0029765 Length:152 Species:Drosophila melanogaster
Sequence 2:NP_001381322.1 Gene:Lyc2 / 688047 RGDID:1593616 Length:148 Species:Rattus norvegicus


Alignment Length:147 Identity:56/147 - (38%)
Similarity:80/147 - (54%) Gaps:11/147 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LGLGLLLAIECGVVSAKRFLRCELARKLLDQ--HGFERSLLSNWICLLEHESDLDTGRITTNA-N 75
            |.||.||.  ...|.||.|..|||||.|...  .|:....|.||:|:.:|||:.||..|..|: :
  Rat     5 LVLGFLLL--SASVQAKVFKHCELARILRSSALAGYRGVSLENWMCMAQHESNFDTEAINYNSTD 67

  Fly    76 GSRNYGLFQINGRF-CQEG---RRGGICNAKCEDFLDENLRESVTCAKR-IQTSDGFRHWAGWQR 135
            .|.:||:||||.|: |.:|   |....|...|...|.:::.:::.|||| ::...|.|.|..|||
  Rat    68 QSTDYGIFQINSRYWCNDGKTPRAVNACGIPCSALLQDDITQAIQCAKRVVRDPQGIRAWVAWQR 132

  Fly   136 YCRNAQNLPNLKVICGI 152
            :|:| ::|......||:
  Rat   133 HCQN-RDLSGYIRNCGV 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16756NP_572222.2 LYZ_C_invert 30..147 CDD:381618 47/124 (38%)
Lyc2NP_001381322.1 LYZ1 19..147 CDD:197612 47/128 (37%)

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