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Protein Alignment HMGB1 and D

DIOPT Version :10

Sequence 1:	NP_002119.1	Gene:	HMGB1 / 3146	HGNCID:	4983	Length:	215	Species:	Homo sapiens
Sequence 2:	NP_524066.1	Gene:	D / 39570	FlyBaseID:	FBgn0000411	Length:	382	Species:	Drosophila melanogaster

Alignment Length:	75	Identity:	22/75 - (29%)
Similarity:	42/75 - (56%)	Gaps:	2/75 - (2%)

- Green bases have known domain annotations that are detailed below.

Human    96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIA 160
            |||.:||.::....|.:|..::|.:...:::|:||..|...|..:|:|:..:|.:|:..:.|:..
  Fly   143 KRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKRLRALHMKEHP 207

Human   161 --AYRAKGKP 168
              .||.:.||
  Fly   208 DYKYRPRRKP 217

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.