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Protein Alignment HMGB1 and Sox21a

DIOPT Version :10

Sequence 1:	NP_002119.1	Gene:	HMGB1 / 3146	HGNCID:	4983	Length:	215	Species:	Homo sapiens
Sequence 2:	NP_001261827.1	Gene:	Sox21a / 39567	FlyBaseID:	FBgn0036411	Length:	407	Species:	Drosophila melanogaster

Alignment Length:	83	Identity:	23/83 - (27%)
Similarity:	42/83 - (50%)	Gaps:	2/83 - (2%)

- Green bases have known domain annotations that are detailed below.

Human    96 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIA 160
            |||.:||.::....|.|:..::|.:...:::|:||..|.......|:|:..:|.:|:..:.|:..
  Fly   122 KRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALHMKEHP 186

Human   161 --AYRAKGKPDAAKKGVV 176
              .||.:.||....|..|
  Fly   187 DYKYRPRRKPKTLNKSPV 204

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.