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Protein Alignment HMGB1 and CG12104

DIOPT Version :10

Sequence 1:	NP_002119.1	Gene:	HMGB1 / 3146	HGNCID:	4983	Length:	215	Species:	Homo sapiens
Sequence 2:	NP_647629.1	Gene:	CG12104 / 38187	FlyBaseID:	FBgn0035238	Length:	250	Species:	Drosophila melanogaster

Alignment Length:	116	Identity:	27/116 - (23%)
Similarity:	48/116 - (41%)	Gaps:	9/116 - (7%)

- Green bases have known domain annotations that are detailed below.

Human    94 APKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKD 158
            ||.:|.:.|.||..:....||.::|..|:..:...:..||.:.....|..|..:..:.|.:|.:.
  Fly    75 APPKPLAPFALFFRDTVTAIKQQNPTCSLEQMQVIVQTMWESLDETQKNVYALRHEQEKREYVRL 139

Human   159 IAAYR-----AKGKPDAAKKGVVKAEKS----KKKKEEEEDEEDEEDEEEE 200
            :..||     ::|..:|.....|...:.    ..|.|..||.:...|.::|
  Fly   140 MRGYRHQLSESEGTSEAEAPPAVATNQPPPLVTTKLESVEDLQQSVDAQQE 190

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.