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Protein Alignment HMGB1 and HmgZ

DIOPT Version :10

Sequence 1:	NP_002119.1	Gene:	HMGB1 / 3146	HGNCID:	4983	Length:	215	Species:	Homo sapiens
Sequence 2:	NP_726106.1	Gene:	HmgZ / 37480	FlyBaseID:	FBgn0010228	Length:	111	Species:	Drosophila melanogaster

Alignment Length:	108	Identity:	46/108 - (42%)
Similarity:	65/108 - (60%)	Gaps:	7/108 - (6%)

- Green bases have known domain annotations that are detailed below.

Human    95 PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDI 159
            ||||.||:.|:.:|.|.:||.::||..:.|:||:.||:|.  ...||..:|:||.|:||:|.|.:
  Fly     6 PKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWR--GLKDKTEWEQKAIKMKEEYNKAV 68

Human   160 AAYRAKGKPDAA-----KKGVVKAEKSKKKKEEEEDEEDEEDE 197
            ..|.|.|..|:.     ||...|..|..||||..|:||::|.|
  Fly    69 KEYEANGGTDSGAPKKRKKAAAKPAKKAKKKESSEEEEEDESE 111

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.