DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spoon and tdrd5

DIOPT Version :9

Sequence 1:NP_726992.2 Gene:spoon / 31459 FlyBaseID:FBgn0263987 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_021325008.1 Gene:tdrd5 / 557999 ZFINID:ZDB-GENE-050208-502 Length:908 Species:Danio rerio


Alignment Length:503 Identity:110/503 - (21%)
Similarity:186/503 - (36%) Gaps:143/503 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 SPRDLPDSVNTRVSFYNRKATQKTV--EPVVIKATRTPKISPENSFLDTNYTNKECEQNNNCEP- 239
            :|::.|:::..|.|..:....|:..  .|   ||:..|:..||.| ||.:..:|.       || 
Zfish   205 TPQNQPENLMRRFSMQSTSPKQRLAGFSP---KASSLPERRPEVS-LDPSSVSKP-------EPV 258

  Fly   240 KEEPS--------KKEADQEELEQDQEQTV---LKE---EVVDSNGNQKRNVDAASPSLSICSVQ 290
            |||.|        ::|..|:.||:....||   |||   :||..|||          .:||.::.
Zfish   259 KEEQSFEETVFKLEEELRQQILEKGTAGTVSQELKEKLRKVVAENGN----------GISIHNLP 313

  Fly   291 SG-DSGKGSSLPRSEATRVKTTYEFLFPISLIGHLYGRKRAFINQIKAKTLA------------- 341
            :. ....|..||.|:.       .||....::|.|            :.|||             
Zfish   314 TEYQRMHGEELPVSQC-------GFLSVTEMVGAL------------SDTLAIQRGTDESESHWM 359

  Fly   342 --------------SVSVG-----------KNPYSGKVRICTIEG----------TES-EIDAAL 370
                          .:|.|           :||.|........|.          |:| |.||.|
Zfish   360 VVEFKPIDTQPCEPELSPGDGTTSSPTGELQNPSSRAFYFSCPESAWEHEETEPLTDSQESDAEL 424

  Fly   371 AMIRQRL--PAKRYPNFTMQRIHFALPQTIVPLST-------ESLYNLQLKLIEGINNDVVVSAV 426
            .:..:.:  ....:|...:.|:      :.|||..       ..::..:.:|:     .|:|...
Zfish   425 RVANKTIHQMVNLFPELMVSRV------SAVPLDAVRCQKLKPPVHRKERELL-----PVLVEQT 478

  Fly   427 LSGSHIFIQHPLHPSHPSLPLLQKQLYDSYS---TMEAPLLPS--LELSAVCVIPINDVW-YRVQ 485
            .|.|:.:|:...:....:|..:..::...||   ..|...||.  :....||.:...|:| |||.
Zfish   479 ESPSYFYIRFSQNKEARALENMMIEMRSCYSYPDVAERYRLPDAYVRPGQVCCVAPRDMWFYRVV 543

  Fly   486 IVDTDPEDEERCVIKFLDFGGYMNVGFNTLRQIRTDFMNVPFQSTECILSNIEPIGGTWSIEAAE 550
            |.:...|.|.:  :.::|:|....|..::||.::..:.::|.|:...:|:.:.||...|...|..
Zfish   544 IHEVFSETEVK--VYYVDYGDITKVERHSLRFLKACYADLPAQAVPAMLAGVRPITNIWPASAVS 606

  Fly   551 ILNKLTKGIVLQAQVAGYNSHNLPEIFLFASLGPNNV---IFINKELV 595
            ...:|.....|.|.|     |:..|.||...|...|.   ::::..|:
Zfish   607 CFQRLCCERTLVAGV-----HSYQEDFLLLFLCDTNTEEDVYVHLALI 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoonNP_726992.2 KH-I 311..373 CDD:238053 19/110 (17%)
TUDOR 413..536 CDD:278965 30/128 (23%)
TUDOR 465..522 CDD:295375 16/59 (27%)
tdrd5XP_021325008.1 LOTUS_1_TDRD5 3..97 CDD:193599
LOTUS_2_TDRD5 133..202 CDD:193589
LOTUS_3_TDRD5 289..364 CDD:193590 21/103 (20%)
TUDOR 472..592 CDD:306940 29/121 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595318
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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