DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spoon and tdrkh

DIOPT Version :9

Sequence 1:NP_726992.2 Gene:spoon / 31459 FlyBaseID:FBgn0263987 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_017213943.1 Gene:tdrkh / 541541 ZFINID:ZDB-GENE-050327-81 Length:885 Species:Danio rerio


Alignment Length:374 Identity:82/374 - (21%)
Similarity:146/374 - (39%) Gaps:99/374 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   317 PISLIGHLYGR---KRAFINQIK-AKTLASVSVGKN-PYSGKVRICTIEGTESEIDAALAMIRQR 376
            |.:..|.:.||   ...|||::. ||...|...|:. ..:||:   ||.||..||.:|..||.::
Zfish   161 PQTAFGRIIGRGGETLKFINRVSGAKVNCSKDRGRTLEENGKI---TITGTRKEIQSAKEMIMEK 222

  Fly   377 LPAKRYPNFTM-QRIH--FALPQTIVPLSTESLYNLQLK--------LIEGINNDVVVSA----- 425
            :    ..|.|: :||.  .||.|...|..|:...|..||        |:..:..::.|:.     
Zfish   223 V----IENETVRKRISQASALRQRRKPPETQGPENELLKPNGKDLPTLVNELKQELPVTVNGYVD 283

  Fly   426 ---------------VLS---------------------GSH--IFIQHPLHPSHPSLPLL---- 448
                           :||                     ..|  :::....:|.|..:.:|    
Zfish   284 STDTAENSLRSEDEEILSPVSPLEISKFEIPSPDLSFQPDEHLEVYVSASENPQHFWIQILGVRS 348

  Fly   449 ---------QKQLYDSYSTMEAPLLPSLELSAVCVIPIND--VWYRVQ---IVDTDPEDEERCVI 499
                     ..:.|:..|:.| ..:.::.:..:...|..|  .|.|.:   ||.:...|     :
Zfish   349 LQLDKLTAEMSRFYNGDSSQE-HRVETIIVGDIVAAPYRDHGTWNRARVLGIVGSGLVD-----L 407

  Fly   500 KFLDFGGYMNVGFNTLRQIRTDFMNVPFQSTECILSNIEPIGGTWSIEAAEILNKLT---KGIVL 561
            .::|||....:....||.:|:||:::|||:.||.|:.:.|.|..|:..|.:...::|   :...|
Zfish   408 YYVDFGDNGELPREHLRSMRSDFLSLPFQAIECSLAGVRPEGEVWTEAALDDFERMTFCAEWKPL 472

  Fly   562 QAQVAGYNSHNL---PEIFLFASLGPNNVIFINKELVGRKLAKWVEMSD 607
            .|::..|:...:   |.:.|:.: .....:.:.|||:  :|...|...|
Zfish   473 LAKLYSYSHSEISSWPSVKLYDN-SQGKAVDLGKELI--RLGHAVSCED 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoonNP_726992.2 KH-I 311..373 CDD:238053 20/60 (33%)
TUDOR 413..536 CDD:278965 32/183 (17%)
TUDOR 465..522 CDD:295375 13/61 (21%)
tdrkhXP_017213943.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2279
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR22948
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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