DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spoon and qin

DIOPT Version :9

Sequence 1:NP_726992.2 Gene:spoon / 31459 FlyBaseID:FBgn0263987 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_650735.3 Gene:qin / 42236 FlyBaseID:FBgn0263974 Length:1857 Species:Drosophila melanogaster


Alignment Length:533 Identity:100/533 - (18%)
Similarity:180/533 - (33%) Gaps:136/533 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 SSSDEKDSPTTMLYGKSAPIKIQSNGRTSNGKHQQQIDSEILKSKIQDAEHKTLCSIDEDFENLS 177
            :.|...:.|||:.....|.|.:      .|||...|    ..|.|:.|...:||.||.:.|.:| 
  Fly   248 NQSYASEIPTTLNSLNMAHIHV------LNGKQVVQ----RAKQKLNDYATETLASISKRFSHL- 301

  Fly   178 SPRDLPDSVNTRVSFYNRKATQKTVEPVVIKATRTPKISPENSFLDTNYTNKECEQNNNCEPKEE 242
                              ....:..|..||:..|...:.|:...      |:...|.:..|...|
  Fly   302 ------------------HGLLQVAELQVIEKLRESSLPPQLKL------NEAMGQLSGYETVIE 342

  Fly   243 PSKKEADQ----------------------EELEQDQEQTVLKEEVVDSNGNQ---KRNVDAA-- 280
            ...|..:.                      |.||  :..|.::...||.|..:   .|.:|.:  
  Fly   343 RLTKSLNSGVGNDMAVPRDVSLRWLLKLICEHLE--KIPTTVQVSKVDENPYRVTCSRFMDISNI 405

  Fly   281 ------SPSLSICSVQSGDSGKG-SSLPRSEATRV---KTTYEFLFPISLIGHLYGRKRAFINQI 335
                  :|::.:|.....:..:. ||.|:.|.|.:   .::.|...|       :.||.......
  Fly   406 FKCEFVNPNIQVCFKTDLEISRSLSSSPKGEITFLTSSSSSKENFDP-------HSRKLLLAQNS 463

  Fly   336 KAKTLASVSV-----GKNPYSGKVRICTIEGTESEIDAALAMIRQRLPAK------RYPNFTMQR 389
            |.|....||.     |||         ..|..:|.:::..|:| ...|||      .:.:..:.:
  Fly   464 KLKKATQVSQSQKKRGKN---------ATEVAQSSLNSTAAII-DEFPAKDLDFLHNFSSLDITK 518

  Fly   390 IHFALPQTIVPLSTESLYNLQLKLIEGINNDVVVSAVLSGSHIFIQHPLHPSHPSLPLLQKQLYD 454
            .:.....:.....|::|              |.|.:|.|....::| .:|.:        ::|.:
  Fly   519 RNKTTEDSSDWFKTDTL--------------VRVRSVQSPEDFYVQ-GIHAA--------QRLRE 560

  Fly   455 SYSTMEAPLLPSLELSAVCVIPIN--------DVWYRVQIVDTDPEDEERCVIKFLDFGGYMNVG 511
            ...|....|..|..:....|:..|        |.:||. :|.....:|....:...|.|.:::|.
  Fly   561 ELDTFAHTLSDSSSVPPTIVVGQNYIIHHKDKDRYYRA-LVSQKLTNENLYNVFLTDIGVHLHVR 624

  Fly   512 FNTLRQIRTDFMNVPFQSTECILSNIEPIGG--TWSIEAAEILNKLTKGIVLQAQVAGYNSHNLP 574
            .:..|.:.....::|:.:..|.||.:.|..|  .|..:|:..|.::.:...::..|....::.|.
  Fly   625 CSDFRVVPERISHLPYSAVHCSLSELMPKNGESEWDSKASAFLKQIVQNNPVRVIVKKALTYELH 689

  Fly   575 EIFLFASLGPNNV 587
            .:.|..|....|:
  Fly   690 GVDLITSNYDTNI 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoonNP_726992.2 KH-I 311..373 CDD:238053 14/66 (21%)
TUDOR 413..536 CDD:278965 24/130 (18%)
TUDOR 465..522 CDD:295375 12/64 (19%)
qinNP_650735.3 zf-RING_5 25..75 CDD:291308
BBOX 139..174 CDD:197662
TUDOR 536..648 CDD:278965 23/121 (19%)
TUDOR 741..859 CDD:278965
TUDOR <805..839 CDD:119391
TUDOR 981..1107 CDD:278965
TUDOR 1296..1403 CDD:278965
TUDOR 1337..1385 CDD:119391
TUDOR 1710..1761 CDD:119391
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22948
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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