DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spoon and tud

DIOPT Version :9

Sequence 1:NP_726992.2 Gene:spoon / 31459 FlyBaseID:FBgn0263987 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_476773.1 Gene:tud / 37417 FlyBaseID:FBgn0003891 Length:2515 Species:Drosophila melanogaster


Alignment Length:733 Identity:154/733 - (21%)
Similarity:248/733 - (33%) Gaps:245/733 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 MVSGRPLLYLSLPGVAF---ILGVF--W-------FRRRYKNCLDKPDDEDSSAINDSSIEPTVQ 75
            |...:|.|..::|...|   :||:.  |       .||...|.:.|           .::|||..
  Fly   125 MFPKQPKLLQNIPLHCFQYIVLGICSEWDQTDLAEVRRLVVNQIVK-----------ITVEPTQI 178

  Fly    76 ARKANGVLQNGKLPQQSAS---KSMNINGTLVNGSGSGSGSSSDE-----------KDSPTTMLY 126
            .            .|:.||   |...:|..||  .....|.|.|:           ||:|     
  Fly   179 C------------DQKFASLRWKDFELNEFLV--QQKQIGVSVDKQLMMDHCKKLWKDNP----- 224

  Fly   127 GKSAPIKIQSNGRTSNGKHQQQIDSEIL------------KSKIQDAEHKTLCSIDEDFENLSSP 179
              .:|:...:|....|.|...:|..|.|            :..:|....:.|.:...|:    :|
  Fly   225 --QSPVTEYNNNSIHNSKTPMEIAREQLAVRQSLAARLDAQRSVQVTPSRPLNADAPDY----TP 283

  Fly   180 RDLP--DSVNTRVSFYNRKATQKTV------------EPVVIKA-TRTPKISPENSFLDTNYT-- 227
            :.||  :..|.:|.......|||.|            :|.|..| ...||.:|.:.:  |.|.  
  Fly   284 KHLPLVNVTNVQVQMPGLNNTQKPVFVSTNPYNRANYQPAVPAAQPYVPKANPRSQY--TYYNVR 346

  Fly   228 -NKEC-----------------EQNNNCE---------PKEEPSKKEADQEELEQDQEQTV---- 261
             ||..                 :|.||..         |...||   ..|.::.....:|.    
  Fly   347 MNKPINAMPPPAGPHVPIQHFNQQANNVSLSYVPARFTPPPTPS---IAQHQIPIPAFRTTSLTV 408

  Fly   262 -LKEEVVDS---NGNQKRNVDAASPSLSICSVQSGDSGKGSSLPRSEATRVKTTYE-------FL 315
             |..:||.|   ||          |.|....::|.|....:.:.:.|.|::|...:       .:
  Fly   409 GLTYDVVISYVENG----------PYLFWVHLKSSDHDLSTMMGQIERTKLKALAQAPELGTACV 463

  Fly   316 FPISLIGHLYGRKRAFINQIKAKTLASVSVGKNPYSGKVRICTIEGTESEIDA------------ 368
            ...|..||||   ||.:..:              |:.:.|:..::...||:.:            
  Fly   464 ARFSEDGHLY---RAMVCAV--------------YAQRYRVVYVDYGNSELLSASDLFQIPPELL 511

  Fly   369 ---------ALAMIRQRLP----AKR-------YPNF--TMQRIHFALPQTIVPLST-------- 403
                     |||..::..|    .||       |.||  |:|     .|:::..:.|        
  Fly   512 EIKPFAFRFALAGTKEIEPIDDSMKRIFKKSAIYRNFELTVQ-----APESVGSMQTCHLNQNGT 571

  Fly   404 ---ESLYNLQ-----LKLIEGINND--VVVSAVLSGSHIFIQHPLHPSHPSLPLLQKQLYD---S 455
               |.|..|:     .|..|.:.||  |.:..:.|.|:.::|...:...      .:||.|   |
  Fly   572 NMLELLRQLKNSRQSYKKAEQLENDDAVEIRFIDSPSNFYVQKVANIGK------FEQLMDEMFS 630

  Fly   456 YSTMEAPLLPSLELSAVCVIPINDVWYRVQIVDTDPEDEERCVIKFLDFGGYMNVGFNTLRQIRT 520
            |......:...|.|.|.|::..:..|||.:|:..|    :..:::.:|||...||..:.:..|..
  Fly   631 YYNANQRVPDQLILGAPCIVKCDQEWYRAEILRVD----DSVIVRHVDFGYEQNVKRHLIGHIAE 691

  Fly   521 DFMNVPFQSTECILSNIEPIGGTWSIEAAEILNKLTKGIVLQAQVAGYNSHNLP-EIFLFASLGP 584
            ..:.:|.|:.:|.|...|      :.|.:|  :|:|....:.|:.:........ .||.....|.
  Fly   692 KHLEMPRQAIKCCLKGFE------NSELSE--DKITDQFEMLAEESNIRRRTFSVRIFRIEPDGL 748

  Fly   585 NNVIFINKEL-VGRKLAK 601
            |.|..:.|.| |.:||.|
  Fly   749 NVVNLLAKNLNVMKKLYK 766

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoonNP_726992.2 KH-I 311..373 CDD:238053 14/89 (16%)
TUDOR 413..536 CDD:278965 31/127 (24%)
TUDOR 465..522 CDD:295375 15/56 (27%)
tudNP_476773.1 DUF1421 198..>397 CDD:284607 43/216 (20%)
TUDOR 406..524 CDD:278965 26/144 (18%)
TUDOR 454..510 CDD:197660 11/72 (15%)
TUDOR 591..707 CDD:278965 31/125 (25%)
TUDOR 644..693 CDD:197660 14/52 (27%)
TUDOR 1012..1132 CDD:278965
TUDOR 1062..1119 CDD:197660
TUDOR 1309..1425 CDD:278965
TUDOR 1354..1411 CDD:197660
TUDOR 1614..1727 CDD:278965
TUDOR 1666..1711 CDD:119391
TUDOR 1791..1906 CDD:278965
TUDOR 1843..1886 CDD:119391
TUDOR 1975..2089 CDD:278965
TUDOR 2028..2069 CDD:119391
TUDOR 2159..2277 CDD:278965
TUDOR 2210..2264 CDD:197660
TUDOR 2345..2458 CDD:278965
TUDOR 2396..2437 CDD:119391
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22948
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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