DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spoon and krimp

DIOPT Version :10

Sequence 1:NP_726992.2 Gene:spoon / 31459 FlyBaseID:FBgn0263987 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_611103.2 Gene:krimp / 36804 FlyBaseID:FBgn0034098 Length:746 Species:Drosophila melanogaster


Alignment Length:476 Identity:83/476 - (17%)
Similarity:157/476 - (32%) Gaps:134/476 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 EKDSPTTMLYGKSAPIKIQSNGRTSNGKHQQQIDSEILKSKIQ-----------DAEHKTLCSID 170
            ||.|...:||....|:........|      ::::.::|..:|           |.|:... |||
  Fly    40 EKLSHADLLYRSLIPLHDHLVASLS------EVNAHVMKLNVQLHINRQSVRLGDYEYYEK-SID 97

  Fly   171 EDFENLSSPRD----------------------LPDSVNTRVSFYNRKATQKTVEPVVIKATRTP 213
            ..:.::.|...                      ||.|.:..|             |||    ...
  Fly    98 NPYSSIRSGLQAIEKPGCAEAICQSSKPAFVECLPSSTSEEV-------------PVV----AVQ 145

  Fly   214 KISPENSFLDTNYTNKECEQNNNCEPK--------EEPSKKEADQEELEQDQEQ------TVLKE 264
            :.|..|.....:..|:...:..:..|:        ||........|:||...|:      .|::.
  Fly   146 EASSTNQLDAISVVNENLSEERDATPQPLAVSKNMEETMPSNPFHEQLEGSLEEIPVGSKIVVET 210

  Fly   265 EVVDSNGNQKRNVDAASPSLSICSVQSGDSGKGSSLPRSEATRVKTTYEFLFPISLIGHLYGRKR 329
            |..::....:.:..|.|.:.|:.:.:.|....|:.:                             
  Fly   211 EKANNPVRSEASAPATSDNQSLLAAKQGTQTIGTGI----------------------------- 246

  Fly   330 AFINQIKAKTLASVSVGKNPYSGKVRICTIEGTESEIDAALAMIRQRLPAKRYPNFTMQRIHFAL 394
              .|:|...|:      ..|.:.::.      ..:|:.||......:||......|.:.      
  Fly   247 --CNKISKSTI------NMPNNWQLE------NPTEVTAASIEKVNKLPKSPRNRFLLP------ 291

  Fly   395 PQTIVPLSTESLYNLQLKLIEGINNDVVVSAVLSGSHI-----FIQHPLHPSHPSLPLLQKQLYD 454
            |:.....:...:||..||.:.....:.:|:|||:...:     ::......|.....:||:||  
  Fly   292 PKGGTETTRRDIYNQILKDMAAFPENTIVTAVLASVDVTDNCAYVAKWDESSDRIKKVLQRQL-- 354

  Fly   455 SYSTMEAPLLPSL-ELSAVCVIPINDVWYRVQIVDTDPEDEERCVIKFLDFGGYMNV-GFNTLRQ 517
              ...|...||.. ::.|| :..||::..|:.|..:.........:  :|||.:::. |..|:.:
  Fly   355 --PLQELDQLPDYGDIFAV-LDSINNIITRITINSSSAGGGYDAYL--IDFGEHIHFDGNETIFK 414

  Fly   518 IRTDFMNVPFQSTECILSNIE 538
            :..|...:|.|:..|.|.|.:
  Fly   415 LPDDIKRLPAQAIRCDLINCD 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoonNP_726992.2 KH-I 311..378 CDD:469614 7/66 (11%)
Tudor_AKAP1 463..539 CDD:410478 19/78 (24%)
krimpNP_611103.2 TUDOR 576..679 CDD:425754
Tudor_dTUD-like 618..663 CDD:410450
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.