DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spoon and Akap1

DIOPT Version :9

Sequence 1:NP_726992.2 Gene:spoon / 31459 FlyBaseID:FBgn0263987 Length:607 Species:Drosophila melanogaster
Sequence 2:NP_446117.1 Gene:Akap1 / 114124 RGDID:620826 Length:854 Species:Rattus norvegicus


Alignment Length:747 Identity:183/747 - (24%)
Similarity:294/747 - (39%) Gaps:208/747 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GRPLL--YLSLPGVAF-------ILGVFWFRRRYKNCLDKPDDEDSSAINDSSIEPTVQARKANG 81
            ||||.  .||.|..|.       .||    |...:..|.:......:|......|.|..|.....
  Rat   142 GRPLFPKDLSFPYEAVEGCKQESALG----RTPGRGWLSQCAASGENARETGGAEGTGDAVLGES 202

  Fly    82 VLQNGKLPQQSASK-SMNINGTLVNGSGSGSGSSS-----DEKDSPTTMLYGK-----SAPIK-- 133
            ||:.|.|||:..|: ..:....|..|.|.|....|     ||.......:.||     ..|:.  
  Rat   203 VLEEGLLPQECVSEVEKSEFPILAPGGGGGEKVRSGPPQVDELLKKEEYIVGKLPSSFVGPVHSE 267

  Fly   134 -IQSNG---------------------RTSNGKHQ-QQIDSEILKSKIQDAEH--------KTLC 167
             ::..|                     :|...|.| :|...:|:...|.:|..        ||:.
  Rat   268 LVKDEGALVPQVKGSQDRSLARELDKDKTLPEKDQIEQTAFQIISQVILEATEEIRATTVGKTVA 332

  Fly   168 SI-----------DED----FENLSSPRDLPDSVNTRVSFYNRKATQKTVEPV------------ 205
            .:           :|.    .:..|..:::||..:||        |..|..|.            
  Rat   333 QVHPTPGTQPQGQEESCVPASQETSLGQEIPDPASTR--------TGATASPSAGAPPPKTYVSC 389

  Fly   206 --------------------VIKATRTPKISPENSFLD------TNYTNKECEQNNN-------- 236
                                :..|...|.::|:...||      .:.|...|..||:        
  Rat   390 LSSPLSGPTKDQKPKNSAHHISLAPCPPPVTPQRQSLDGASNPRGDDTFVTCTSNNSQSVLSVTS 454

  Fly   237 ---CEPKEEPSKKEADQEEL---EQDQEQT-------------VLKEEVVD-------------- 268
               |......|:.|....|.   ..|:..|             |||||:.|              
  Rat   455 LGLCSDPVSTSRLEDSCTETISSSGDKAVTPPLPDSTEPFSNGVLKEELSDLGTEDGWTMDTEAD 519

  Fly   269 ----SNGNQKRNVDAA-------SPSLSICSVQSGDSGKGSSLPRSEATRVKTTYEFLFPISLIG 322
                |:||...:||:.       ||.    :||:|.:.|...|         ..:|...|..|:|
  Rat   520 HSGGSDGNSMDSVDSCCGLTKPDSPQ----TVQAGSNPKKVDL---------IIWEIEVPKHLVG 571

  Fly   323 HLYGRKRAFINQIKAKTLASVSVGKNPYSGKVRICTIEGTESEIDAALAMIRQRLPAKRYPNFTM 387
            .|.|::..:::.:|..:.|.:.:...||:..::||.|||::..:|.||.:|     .|::....:
  Rat   572 RLIGKQGRYVSFLKQTSGAKIYISTLPYTQNIQICHIEGSQHHVDKALNLI-----GKKFKELNL 631

  Fly   388 QRIH------FALPQTIVPLSTESLYNLQLKLIEGINNDVVVSAVLSGSHIFIQHPLHPSHPSLP 446
            ..|:      .|||.  :|:::      .|.|.:||..:|:|...::..|:|:|...||:..:|.
  Rat   632 TNIYAPPLPSLALPS--LPMTS------WLMLPDGITVEVIVVNQVNAGHLFVQQHTHPTFHALR 688

  Fly   447 LLQKQLYDSYSTMEAPLLPS-LELSAVCVIPIND-VWYRVQIVDTDPEDEERCVIKFLDFGGYMN 509
            .|.:|:|..||....|.||: :|::.:|..|..| .|:|.|:|.:..|..| ..|:::|:|||..
  Rat   689 SLDQQMYLCYSQPGIPTLPTPVEITVICAAPGADGAWWRAQVVASYEETNE-VEIRYVDYGGYKR 752

  Fly   510 VGFNTLRQIRTDFMNVPFQSTECILSNIEPIGGT--WSIEAAEILNKLTKGIVLQAQVAGYNSHN 572
            |..:.|||||:||:.:|||..|.:|.::.|:...  :|.||...::::|....|.|||..|::..
  Rat   753 VKVDVLRQIRSDFVTLPFQGAEVLLDSVVPLSDDDHFSPEADAAMSEMTGNTALLAQVTSYSATG 817

  Fly   573 LPEIFLFASLGPNNVIFINKELVGRKLAKWVE 604
            ||.|.|::.:| :.|:.||:.||.|.||:||:
  Rat   818 LPLIQLWSVVG-DEVVLINRSLVERGLAQWVD 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoonNP_726992.2 KH-I 311..373 CDD:238053 18/61 (30%)
TUDOR 413..536 CDD:278965 47/124 (38%)
TUDOR 465..522 CDD:295375 22/58 (38%)
Akap1NP_446117.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 62..115
PKA-RII subunit binding domain 303..316 2/12 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 333..437 14/111 (13%)
HNF-1_N 394..>510 CDD:282645 21/115 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 473..495 3/21 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 509..551 9/45 (20%)
KH-I 562..622 CDD:238053 18/59 (31%)
TUDOR 655..777 CDD:278965 46/122 (38%)
TUDOR 707..765 CDD:197660 22/58 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353234
Domainoid 1 1.000 88 1.000 Domainoid score I7797
eggNOG 1 0.900 - - E1_KOG2279
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006304
OrthoInspector 1 1.000 - - oto98120
orthoMCL 1 0.900 - - OOG6_107934
Panther 1 1.100 - - O PTHR22948
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4588
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.740

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