DRSC/TRiP Functional Genomics Resources

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Protein Alignment spoon and akap1a

DIOPT Version :9

Sequence 1:NP_726992.2 Gene:spoon / 31459 FlyBaseID:FBgn0263987 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_001342303.3 Gene:akap1a / 100002545 ZFINID:ZDB-GENE-030131-5980 Length:596 Species:Danio rerio


Alignment Length:635 Identity:152/635 - (23%)
Similarity:271/635 - (42%) Gaps:103/635 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 RPLLYLSLPGVAFILGVFW--FRRRYKNCLDKPDDEDSSAINDSSIEPTVQARKANGVLQNGKLP 89
            |||:.::   |..:||..|  ||||.|.......:|:...::.||  |...:...||||....|.
Zfish     6 RPLVSVT---VLTLLGWCWYSFRRRRKIKASLWTEEEKCLLDGSS--PVQFSPTDNGVLGQSDLK 65

  Fly    90 -QQSASKSMNINGTLVNGSGSGSGSSSDEKDSPTTMLYGKSAPIKIQSNGRTS--------NGKH 145
             .|:.|:|..|....     ..|......|.:.|:.:.|.:..::.:..|..|        :.|.
Zfish    66 MNQNISRSPEITELT-----DTSPFVEMHKFTSTSPVIGLNERVRPEPEGEVSIRFPETNQSKKE 125

  Fly   146 QQQIDSEILKSKIQDAEHKTLCSIDEDFENLSSPRDL-PDSVNTRVSFYNRKATQKTVEPVVIKA 209
            :.....|:.:....|         |:|..:||   |. |:.....:...:....|:.:.....:.
Zfish   126 KDDFTGEVHEDDFTD---------DKDGSSLS---DFSPEQSQENMEIISSVLVQQVIHTTENQH 178

  Fly   210 TRTPKISPENSFLDTNYTNKECEQNNNCEPKEEPSKKEADQEELEQDQEQTVLKEEVVDSNG-NQ 273
            :..|...|.||...:  .:::..|:.:....:...:..:.:::|..|     |...|.|.:| |.
Zfish   179 SSDPLSRPPNSGFQS--ASQDLVQHQSISGDDNDRETGSFRKKLLSD-----LGASVGDDSGCNS 236

  Fly   274 KRNVDAASPSLSICSVQSGD-----------SGKGSSLP------RSEA-------------TRV 308
            ..:.|.:......|.:...:           |..|..:|      ..||             |::
Zfish   237 SFSEDVSGSEGLTCEISEEEQSFLMTESDTTSIDGKMIPSILGEGEEEAWHGSGVESCIVADTQM 301

  Fly   309 KT----------TYEFLFPISLIGHLYGRKRAFINQIKAKTLASVSVGKNPYSGKVRICTIEGTE 363
            .:          .::...|..|:|.|.|::..|:|.:|..:.|.:.|...|::..::||.|:|::
Zfish   302 SSLAPPPSPPIIQWDIEVPTHLVGRLIGKQGKFMNFLKQSSGAKIYVSTLPFTHDIQICHIQGSQ 366

  Fly   364 SEIDAALAMIRQRLPAKRYPNFTMQRIHFALPQTIVPLSTESLYNLQLKLIEGINNDVVVSAVLS 428
            .::|.||:::|     |::.:..:..   ..|...:|:::      .|.|.:.:..:|:||.|.:
Zfish   367 QQVDEALSLVR-----KKFKDLDLSN---CAPLPCLPITS------WLLLPQDVFVEVMVSRVEA 417

  Fly   429 GSHIFIQHPLHPSHPSLPLLQKQLYDSYSTMEAPLLPS-LELSAVCVIPI-NDVWYRVQIVDTDP 491
            ..|:|:....||||..||.|.:.:...||....|.||: :|:..||..|: ...|.|.|::..|.
Zfish   418 AHHLFVHQHSHPSHQVLPTLIQAMQLCYSQPGCPSLPTPVEVGVVCAAPVTGSGWQRAQVIQYDG 482

  Fly   492 EDEERCVIKFLDFGGYMNVGFNTLRQIRTDFMNVPFQSTECILSNIEPIGG--TWSIEAAEILNK 554
            | .....|:::|.|||..|...||||||:||:.:|||:.|.:|.||.|:.|  .:|:||.|.|.:
Zfish   483 E-TGTTHIRYVDSGGYDTVNSTTLRQIRSDFVTLPFQAAEVLLDNIMPLPGDEEFSLEAKEALEE 546

  Fly   555 LTKGIVLQAQVAGYNSHNLPEIFLFASLGPNNVIFINKELVGRKLAKWVE 604
            .|..:.|..:|.| :...||.:.|:...| :.::.||:.|..:....|.:
Zfish   547 STANVALILKVTG-SQDGLPLVHLWKQAG-DEMVLINRSLADQGFFSWFD 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoonNP_726992.2 KH-I 311..373 CDD:238053 18/61 (30%)
TUDOR 413..536 CDD:278965 47/124 (38%)
TUDOR 465..522 CDD:295375 22/58 (38%)
akap1aXP_001342303.3 KH-I 317..376 CDD:238053 18/58 (31%)
TUDOR 402..526 CDD:278965 47/124 (38%)
TUDOR 458..512 CDD:197660 21/54 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595319
Domainoid 1 1.000 93 1.000 Domainoid score I7508
eggNOG 1 0.900 - - E1_KOG2279
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 173 1.000 Inparanoid score I4068
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006304
OrthoInspector 1 1.000 - - otm24206
orthoMCL 1 0.900 - - OOG6_107934
Panther 1 1.100 - - O PTHR22948
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2941
SonicParanoid 1 1.000 - - X4588
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.780

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