DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp16-45 and USP3

DIOPT Version :10

Sequence 1:NP_572220.1 Gene:Usp16-45 / 31458 FlyBaseID:FBgn0029763 Length:1126 Species:Drosophila melanogaster
Sequence 2:NP_006528.2 Gene:USP3 / 9960 HGNCID:12626 Length:520 Species:Homo sapiens


Alignment Length:483 Identity:110/483 - (22%)
Similarity:174/483 - (36%) Gaps:157/483 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 ASEGAVGPGGNPVTF-----EFDNTLWLCLKCGSQLCGRARHKHALEHYQ------TPHSDS--- 138
            |.:.|..|.|:|.::     ..:.:.|:||.|.|..|||..:.||.:||:      |.|..|   
Human    13 APDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQ 77

  Fly   139 ----HALAMNTRSFDIWCYECDMKICSNLRKNLLECVELVKKLAQKPPTSTVTPSTPTISYIEEK 199
                |.:.|:..|:..:||.||..:.::.:..|   |:.|::..|....|..|..       ..|
Human    78 DKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGL---VQKVREHLQNLENSAFTAD-------RHK 132

  Fly   200 LKAALEHLTPIVPMTGGSFDDSSSRGSLAAAGGGGGVGSSRNRQVAIPMPPPEPSSGLSTSDSLT 264
            .:..||:                               |:.|.::            |..:.|.|
Human   133 KRKLLEN-------------------------------STLNSKL------------LKVNGSTT 154

  Fly   265 SVPGMAKRIDQYSATTNGNTGNKRLLTLETPRIENERLPRVRGLTNLGNTCFFNAVMQCLAQTPF 329
            ::          .||                           ||.|||||||.||::|.|:....
Human   155 AI----------CAT---------------------------GLRNLGNTCFMNAILQSLSNIEQ 182

  Fly   330 LLSVLKELSEPGEEFILPGG------TFTIKDKGDIELPMI----KGTLSSWGGLTAALANALEE 384
            .....|||  |..|  |..|      |:..:.:||..:.::    |...:.|.|...|       
Human   183 FCCYFKEL--PAVE--LRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTA------- 236

  Fly   385 LQAGGSVFTPRKLFDRLCVKCPQFTGGDQHDAHELLRQLLESVRNEDLKRYQRVILQNLGYKDQD 449
                   |:|..||..:....|.|.|..|.||||.:|.||:.:..|         ||. |:....
Human   237 -------FSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE---------LQG-GFNGVS 284

  Fly   450 VNSVSEE-----MRQKCKIYGNQAGDRILRPEQVFRGFLVSTLTCQDCHNVSSRHEYFLDMSLPV 509
            .:::.:|     ...||.|.|   ...::  ..:|.|.|.:.:.|..|...|.:.:.|||:||.:
Human   285 RSAILQENSTLSASNKCCING---ASTVV--TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI 344

  Fly   510 AVE-KPQPPQRRKPSPELSLTSSSSSVT 536
            ..: :.:..:.::..|..||.....|.|
Human   345 PSQFRSKRSKNQENGPVCSLRDCLRSFT 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp16-45NP_572220.1 zf-UBP 108..159 CDD:460464 22/63 (35%)
UBP12 <307..990 CDD:227847 67/246 (27%)
Peptidase_C19 307..>512 CDD:470612 62/219 (28%)
Peptidase_C19K <849..1123 CDD:239132
USP3NP_006528.2 zf-UBP 29..105 CDD:460464 22/75 (29%)
UCH 159..508 CDD:425685 68/274 (25%)
Blue background indicates that the domain is not in the aligned region.

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