DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp16-45 and UBP12

DIOPT Version :9

Sequence 1:NP_001284890.1 Gene:Usp16-45 / 31458 FlyBaseID:FBgn0029763 Length:1126 Species:Drosophila melanogaster
Sequence 2:NP_012338.1 Gene:UBP12 / 853242 SGDID:S000003733 Length:1254 Species:Saccharomyces cerevisiae


Alignment Length:1002 Identity:194/1002 - (19%)
Similarity:313/1002 - (31%) Gaps:351/1002 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   266 VPGM-AKRIDQYSATTNGNTGNKRLLTLETPRIE-NERLPR-------------VRGLTNLGNTC 315
            :|.| ..|:|:.       |.|...|.:|...|| |...|.             ..||.||||||
Yeast   316 IPDMFENRLDKI-------TSNPSDLVIEIKPIEGNHHWPSNYFAYNKLEPASGTTGLVNLGNTC 373

  Fly   316 FFNAVMQCLAQTPFLLSVLKELSEPGEEFILPGGTFTIKDKGDIELPMIKGTLSSWGGLTAALAN 380
            :.|:.:|||...|.|           .::.|..|   .:|:.:.|.|     |...|.:..|.::
Yeast   374 YMNSALQCLVHIPQL-----------RDYFLYDG---YEDEINEENP-----LGYHGYVARAFSD 419

  Fly   381 ALEEL-------QAGGSVFTPRKLFDRLCVKCPQFTGGDQHDAHELLRQLLESVRNEDL-----K 433
            .:::|       ....:.|.|......:......|:|..|.|:.|.|..||:|: :|||     |
Yeast   420 LVQKLFQNRMSIMQRNAAFPPSMFKSTIGHFNSMFSGYMQQDSQEFLAFLLDSL-HEDLNRIIKK 483

  Fly   434 RYQRVILQNLGYKDQDVNSVSE--------EMRQKCKIYGNQAGDRILRPEQVFRGFLVSTLTCQ 490
            .|......:.|....|.|.|.:        .:::.|.:.           ..:|.|...|||.|.
Yeast   484 EYTEKPSLSPGDDVNDWNVVKKLADDTWEMHLKRNCSVI-----------TDLFVGMYKSTLYCP 537

  Fly   491 DCHNVSSRHEYFLDMSLPVAVE-------KPQPPQRRKPSPELSLTSSSSSV------------- 535
            :|.|||...:.:.|::||:.|:       |..|........|:.|:.||:.:             
Yeast   538 ECQNVSITFDPYNDVTLPLPVDTVWDKTIKIFPMNSPPLLLEVELSKSSTYMDLKNYVGKMSGLD 602

  Fly   536 --------------------TPSTGQ-----------------------------PTINTKFTDG 551
                                |.|..|                             |.:||:...|
Yeast   603 PNTLFGCEIFSNQIYVNYESTESNAQFLTLQELIKPADDVIFYELPVTNDNEVIVPVLNTRIEKG 667

  Fly   552 SVNFTASSPSFFLHAHEAASLGPSKSQVKKEKERQRKAKRAAKKRQKSSLNLNG------NDSGN 610
            ..|.......||:...|.....|...::               |.|...::|:|      ...||
Yeast   668 YKNAMLFGVPFFITLKEDELNNPGAIRM---------------KLQNRFVHLSGGYIPFPEPVGN 717

  Fly   611 GNELAES--------------------------VDQDDASLASLGAGDGQANDGLEQTNGQTEDS 649
            ..:.|::                          |...|.|..|:.....:........|....:.
Yeast   718 RTDFADAFPLLVEKYPDVEFEQYKDILQYTSIKVTDKDKSFFSIKILSVEKEQQFASNNRTGPNF 782

  Fly   650 TTSSVTTSEHSDADVEDNLVEDTAAPSTNNVPSSTASLTAPSKTYMDSNGNAQPPGEKRDDTPEH 714
            .|.....:.....|::|.| ||......|.  ||...........:|..|:.:....|....|  
Yeast   783 WTPISQLNLDKATDIDDKL-EDVVKDIYNY--SSLVDCAEGVLMQVDDEGDTEGSEAKNFSKP-- 842

  Fly   715 MDKDSLEEDENDSGIATSPAPTATNSSTSTSATGNNNSVAGSGLSGSSGALEDPLA--PASL--V 775
              ..|.:::||..        |.||:....:....:..:..:.......:.|..|.  |.:|  :
Yeast   843 --FQSGDDEENKE--------TVTNNENVNNTNDRDEDMELTDDVEEDASTEPELTDKPEALDKI 897

  Fly   776 TAGLSEKGASVIRQVSVGAEQGASNGTEDADGEAKAI--EQPEKTPSQAQAMAQAQARTKRVRTQ 838
            ...|:....:::....:...:.:..|:.:|..:.|..  |.|...|::....|:.:....:.||.
Yeast   898 KDSLTSTPFAILSMNDIIVCEWSELGSNEAFSDDKIYNWENPATLPNKELENAKLERSNAKERTI 962

  Fly   839 SYSDWSTTIAPRYQCEDGECSVQSCLNNFTAVELMTGQNKVGCDSCTQRINGSDPKAKSVNTNAT 903
            :..|                    ||..|:..|::...:...|.:|.:            :..||
Yeast   963 TLDD--------------------CLQLFSKPEILGLTDSWYCPTCKE------------HRQAT 995

  Fly   904 KQLLVSSPPAVLILHLKRFQLGPRCIFRKLTRPVSYP-NLLDIAAFCGSKVKNLPNIDRKQKKLL 967
            ||:.:.:.|.:|::|||||: ..|....|:...|::| ..||::.:.  ..|:.|      :.|:
Yeast   996 KQIQLWNTPDILLIHLKRFE-SQRSFSDKIDATVNFPITDLDLSRYV--VYKDDP------RGLI 1051

  Fly   968 YALYGVVEHSGGMYGGHYTAYVKVRPKVAPGDKRWKFLPHGSKAELDQDDDQLKKLEELLAKEKA 1032
            |.||.|..|.||:.|||||||||                                          
Yeast  1052 YDLYAVDNHYGGLGGGHYTAYVK------------------------------------------ 1074

  Fly  1033 REQHLKVLDDSDDFSNSSSNSSTSDESQTPATPLEEQQTQQAQQPQQPQQLEEAANVRAPPGKWY 1097
                           |.:.|                                          |||
Yeast  1075 ---------------NFADN------------------------------------------KWY 1082

  Fly  1098 YVSDSRVQEVSEDTALKAQAYLLFYER 1124
            |..||||.|.:.:.::...||||||.|
Yeast  1083 YFDDSRVTETAPENSIAGSAYLLFYIR 1109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp16-45NP_001284890.1 zf-UBP 108..159 CDD:280334
Peptidase_C19 307..>512 CDD:271592 57/224 (25%)
Peptidase_C19K <849..1123 CDD:239132 58/274 (21%)
UBP12NP_012338.1 UBP12 99..1111 CDD:227847 194/1002 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5560
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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