DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp16-45 and UBP1

DIOPT Version :9

Sequence 1:NP_001284890.1 Gene:Usp16-45 / 31458 FlyBaseID:FBgn0029763 Length:1126 Species:Drosophila melanogaster
Sequence 2:NP_010161.1 Gene:UBP1 / 851435 SGDID:S000002280 Length:809 Species:Saccharomyces cerevisiae


Alignment Length:979 Identity:162/979 - (16%)
Similarity:268/979 - (27%) Gaps:444/979 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 TTNGNTGNKRLLTLETPR-----IENERLPR---VRGLTNLGNTCFFNAVMQCLAQTPFLLSVLK 335
            |||....|.  |:...||     ::.|.|.|   :.||.|.|||||.|:|:|.||.:        
Yeast    68 TTNFRNNNS--LSRWLPRSKFTHLDEEILKRGGFIAGLVNDGNTCFMNSVLQSLASS-------- 122

  Fly   336 ELSEPGEEFILPGGTFTIKDKGDIELPMIKGTLSSWGGLTAALANALEELQAGGSVFTPRKLFDR 400
                                                                             
Yeast   123 ----------------------------------------------------------------- 122

  Fly   401 LCVKCPQFTGGDQHDAHELLRQLLESVRNEDLKRYQRVILQNLGYKD-------QDVNSVSEEMR 458
                                |:|:|.:.|..::.|:. |.||...::       ||..:..:..|
Yeast   123 --------------------RELMEFLDNNVIRTYEE-IEQNEHNEEGNGQESAQDEATHKKNTR 166

  Fly   459 QKCKIYGNQAGDRILRPEQVFRGFLVSTLTCQDCHNVSSRHEYFLDMSLPVAVEKPQPPQRRKPS 523
            :..|:||                                                       |..
Yeast   167 KGGKVYG-------------------------------------------------------KHK 176

  Fly   524 PELSLTSSSSSVTPSTGQPTINTKFTDGSVNFTASSPSFFLHAHEAASLGPSKSQVKKEKERQRK 588
            .:|:..|||......:.:|.|                :|.:...:..|...:|....|...:...
Yeast   177 KKLNRKSSSKEDEEKSQEPDI----------------TFSVALRDLLSALNAKYYRDKPYFKTNS 225

  Fly   589 AKRAAKKRQKSSLNLNGNDSGNGNELAESVDQDDASLASLGAGDGQANDGLEQTNGQTEDSTTSS 653
            ..:|..|..:.:: |.|.|..:..|..:::      ||.|.:.....|         ||...|:.
Yeast   226 LLKAMSKSPRKNI-LLGYDQEDAQEFFQNI------LAELESNVKSLN---------TEKLDTTP 274

  Fly   654 VTTSEHSDADVEDNLVEDTAAPSTNNVPSSTASLTAPSKTYMDSNGNAQPPGEKRDDTPEHMDKD 718
            |..||..|    |.||             ...:|......|:.:               |.:|.:
Yeast   275 VAKSELPD----DALV-------------GQLNLGEVGTVYIPT---------------EQIDPN 307

  Fly   719 SLEEDENDSGIA----TSPAPTATNSSTSTSATGNNNSVAGSGLSGSSGALEDPLAPASLVTAGL 779
            |:..|::.....    .:|....|.........|.|..:..|..||.|  |..|           
Yeast   308 SILHDKSIQNFTPFKLMTPLDGITAERIGCLQCGENGGIRYSVFSGLS--LNLP----------- 359

  Fly   780 SEKGASVIRQVSVGAEQGASNGTEDADGEAKAIEQPEKTPSQAQAMAQAQARTKRVRTQSYSDWS 844
            :|...|.::                                               .:|..||||
Yeast   360 NENIGSTLK-----------------------------------------------LSQLLSDWS 377

  Fly   845 -TTIAPRYQCEDGECSVQSCLNNFTAVELMTGQNKVGCDSCTQRINGSDPK-------------- 894
             ..|....:|  ..|::.:..::      :.||.|    ...::..||.|:              
Yeast   378 KPEIIEGVEC--NRCALTAAHSH------LFGQLK----EFEKKPEGSIPEKLINAVKDRVHQIE 430

  Fly   895 ---AKSV----------------NTNATKQLLVSSPPAVLILHLKRFQLGPRC-IFRKLTRPVSY 939
               ||.|                ..:.:||:|:|.||.:|.:|:.|....||. :.||....|.:
Yeast   431 EVLAKPVIDDEDYKKLHTANMVRKCSKSKQILISRPPPLLSIHINRSVFDPRTYMIRKNNSKVLF 495

  Fly   940 PNLLDIAAFCGSKVKNLPNID-----RKQKKLLYALYGVVEHSGGMYGGHYTAYVKVRPKVAPGD 999
            .:.|::|.:|..  .|..|:|     .|::|.........|:.||.|      |.|:        
Yeast   496 KSRLNLAPWCCD--INEINLDARLPMSKKEKAAQQDSSEDENIGGEY------YTKL-------- 544

  Fly  1000 KRWKFLPHGSKAELDQDDDQLKKLEELLAKEKAREQHLKVL---------------DDSDDFSNS 1049
                   |....:..:|.::.|:.::......:...|.|.:               ||.|::...
Yeast   545 -------HERFEQEFEDSEEEKEYDDAEGNYASHYNHTKDISNYDPLNGEVDGVTSDDEDEYIEE 602

  Fly  1050 S------------SNSSTSDESQTPATPLEEQQTQQAQQPQ--QPQQLEEAAN----VRAPP--- 1093
            :            .:|...:|:......|:|.......:|:  ...|||.:::    :.|||   
Yeast   603 TDALGNTIKKRIIEHSDVENENVKDNEELQEIDNVSLDEPKINVEDQLETSSDEEDVIPAPPINY 667

  Fly  1094 --------------------------------------GKWYYVSDSRVQEVSEDTALKAQ-AYL 1119
                                                  |.|:.:||..|..|.|...|... .::
Yeast   668 ARSFSTVPATPLTYSLRSVIVHYGTHNYGHYIAFRKYRGCWWRISDETVYVVDEAEVLSTPGVFM 732

  Fly  1120 LFYE 1123
            ||||
Yeast   733 LFYE 736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp16-45NP_001284890.1 zf-UBP 108..159 CDD:280334
Peptidase_C19 307..>512 CDD:271592 27/211 (13%)
Peptidase_C19K <849..1123 CDD:239132 68/387 (18%)
UBP1NP_010161.1 Peptidase_C19 101..>293 CDD:351799 59/389 (15%)
Peptidase_C19F 102..736 CDD:239127 150/941 (16%)
Peptidase_C19 <427..>510 CDD:351799 20/84 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343356
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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