DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp16-45 and UBP2

DIOPT Version :10

Sequence 1:NP_572220.1 Gene:Usp16-45 / 31458 FlyBaseID:FBgn0029763 Length:1126 Species:Drosophila melanogaster
Sequence 2:NP_563719.1 Gene:UBP2 / 839397 AraportID:AT1G04860 Length:961 Species:Arabidopsis thaliana


Alignment Length:1240 Identity:268/1240 - (21%)
Similarity:419/1240 - (33%) Gaps:475/1240 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ATPTTASCQHIKKAVDAARLRRLLKSTGLLYECSQCQK--LGKTAGSAAGAGASE--GAVGPGGN 98
            |...|.:|.|..||::..::...:||:..: :|::|.:  .||....|.|:...:  .:..|..|
plant    43 AVKETQACVHFDKALNLEKVLDKIKSSRQI-KCAECNEGVYGKRGTKAKGSKGKKDFSSSDPKSN 106

  Fly    99 PVTFEFDNTLWLCLKCGSQLCG-----RARHKHALEHYQTPHSDSHALAMNTRSFDI-WCYECDM 157
                  :..:||||:||..:||     .....|.|.|.:...   |.|.:...:..: ||:.|.:
plant   107 ------NKAIWLCLECGCYVCGGVGLPNGPQSHVLRHSRVTR---HRLVIQWENPQLRWCFPCQL 162

  Fly   158 -----KICSNLRKNLL-ECVELVKKLAQKPPTSTVTPSTPTISYIEEKLKAALEHLTPIVPMTGG 216
                 |..:..:|::| |.|:|:|                                       |.
plant   163 LLPVEKEDNGEKKDVLSEVVKLIK---------------------------------------GR 188

  Fly   217 SFDDSSSRGSLAAAGGGGGVGSSRNRQVAIPMPPPEPSSGLSTSDSLTSVPGMAKRIDQYSATTN 281
            |.::.:|........|.|.:.|....:.|:            |||        .:..|.|.    
plant   189 SLNNLASSDIEDQCSGSGSITSDIKLEGAV------------TSD--------IEARDGYV---- 229

  Fly   282 GNTGNKRLLTLETPRIENERLPRVRGLTNLGNTCFFNAVMQCLAQTPFLLSVLKELSEPGEEFIL 346
                                   ||||.|||||||||::||.|.          .|....:.|:.
plant   230 -----------------------VRGLVNLGNTCFFNSIMQNLL----------SLDRLRDHFLK 261

  Fly   347 PGGTFTIKDKGDIELPMIKGTLSSWGGLTAALANALEEL------QAG-GSVFTPRKLFDRLCVK 404
            ..|:                      |:...||::|.:|      :|| .||..||..|...|.|
plant   262 ENGS----------------------GVGGPLASSLRKLFTETKPEAGLKSVINPRAFFGSFCSK 304

  Fly   405 CPQFTGGDQHDAHELLRQLLESVRNEDLKRYQRVILQNLGYKDQDVNSVSEEMRQKCKIYGNQAG 469
            .|||.|.||||:|||||.||:|:..|     :..:.:..|..|.|..|.:               
plant   305 APQFRGYDQHDSHELLRCLLDSLSTE-----ESALRKKRGVSDNDEKSTT--------------- 349

  Fly   470 DRILRPEQVFRGFLVSTLTCQDCHNVSSRHEYFLDMSLPVAVEKPQPPQRRKPSPELSLTSSSSS 534
                ..|.||.|...|.::|.:|.:.|..:|.|||:||||..:|..|   :||.|          
plant   350 ----LIESVFGGETSSIVSCMECGHSSKVYEPFLDLSLPVPFKKSPP---KKPQP---------- 397

  Fly   535 VTPSTGQPTINTKFTDGSVNFTASSPSFFLHAHEAASLGPSKSQVKKEKERQRKAKRAAKKRQKS 599
                                                     .|:.||.|...::..:...|..|.
plant   398 -----------------------------------------VSRAKKAKLPPKRVPKNVSKVSKV 421

  Fly   600 SLNLNG------NDSGNGNELAESVDQDDASLASLGAG------------DGQANDGLEQTNGQT 646
            |..|.|      |.||....:....|...:|||.|..|            :.||::...|::...
plant   422 SKVLPGMVLSELNSSGKSMAVTADSDTSCSSLAPLDNGPVLETPSVLTLDNNQASESASQSDTGF 486

  Fly   647 EDSTTSSV---TTSEHSDADVEDNLVEDTAAPSTNN-VPS----STASLTAPSKTYMDSNGNAQP 703
            :.|....:   |:.:.::.|::::.:::......|. |||    :.:|:::..:|.   .||.  
plant   487 DGSWLDFIGPETSGDETNLDMQEDGIDNVITAEVNQIVPSPNIVANSSVSSGDQTL---EGNT-- 546

  Fly   704 PGEKRDDTPEHMDKDSLEEDEND-SGIATSPAPTATNSSTSTSATGNNNSVAGSGLSGSS----G 763
              |:.....|.:.|.....||.| ..:.:...|..:..|...|.........|.|.|.||    .
plant   547 --ERLMQDYEEIAKAEANLDEKDVQAMQSDECPATSGISAEFSQASCIGCDPGIGESSSSVNPWD 609

  Fly   764 ALEDPLAPASLVTAGLSEKGASVIRQVSVGAEQGASNGTEDADGEAK---------AIEQPEKT- 818
            ..|.||..|......:..|..| ....||..|..||:.....|.|.:         ..::||.| 
plant   610 EEELPLVVADSQILYMPYKEIS-CNDKSVEGECEASSSFVTGDHEPQNSDFVDFGGLFDEPETTE 673

  Fly   819 ------PSQAQAMAQAQARTKRVRTQSYSDWSTTIAPRYQCEDGE--CSVQSCLNNFTAVELMTG 875
                  ||:|:|..           ..:..:|:...|. :.:|.:  .||:.||.:||..|:::.
plant   674 GPVFGPPSKAEASG-----------VGFMAFSSESDPE-EIDDSDLPVSVERCLGHFTKHEILSD 726

  Fly   876 QNKVGCDSCTQRI----------------------NG-------------------SDP------ 893
            .|...|::|::.:                      ||                   .||      
plant   727 DNAWNCENCSKNLKLQRLREKRKSNEDESRSSNTSNGWVKENEDEGFGETEILAVKQDPNDTSCV 791

  Fly   894 --------------------------------KAKSVNTNATKQLLVSSPPAVLILHLKRFQLGP 926
                                            |..:|..:|||::|::..|.||.:|||||....
plant   792 KDHSSDGRKAARIHSADESESKGTQDEDEDSEKVITVKRDATKKVLINKAPPVLTIHLKRFSQDL 856

  Fly   927 RCIFRKLTRPVSYPNLLDIAAFCGSKVKNLPNIDRKQKKLLYALYGVVEHSGGMYGGHYTAYVKV 991
            |....||...|::..::|:..:..|:...       :...:|.|.|:|||||.|.||||.|||: 
plant   857 RGRLSKLNGHVAFKEVIDLRQYMDSRCSG-------EDPPVYRLAGLVEHSGTMRGGHYVAYVR- 913

  Fly   992 RPKVAPGDKRWKFLPHGSKAELDQDDDQLKKLEELLAKEKAREQHLKVLDDSDDFSNSSSNSSTS 1056
                  |.:|.|                                             .:.:|||:
plant   914 ------GGQRVK---------------------------------------------ETDSSSTA 927

  Fly  1057 DESQTPATPLEEQQTQQAQQPQQPQQLEEAANVRAPPGKWYYVSDSRVQEVSEDTALKAQAYLLF 1121
                                                   ||.|||:.|::||.:..|.::||:||
plant   928 ---------------------------------------WYNVSDAYVRQVSLEKVLHSEAYILF 953

  Fly  1122 YERIY 1126
            ||||:
plant   954 YERIF 958

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp16-45NP_572220.1 zf-UBP 108..159 CDD:460464 16/61 (26%)
UBP12 <307..990 CDD:227847 191/817 (23%)
Peptidase_C19 307..>512 CDD:470612 68/211 (32%)
Peptidase_C19K <849..1123 CDD:239132 71/354 (20%)
UBP2NP_563719.1 zf-UBP 105..161 CDD:460464 16/64 (25%)
UBP12 <232..956 CDD:227847 212/951 (22%)
Peptidase_C19 232..>383 CDD:470612 64/206 (31%)
Peptidase_C19 <703..955 CDD:470612 70/349 (20%)

Return to query results.
Submit another query.