DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp16-45 and UBP1

DIOPT Version :9

Sequence 1:NP_001284890.1 Gene:Usp16-45 / 31458 FlyBaseID:FBgn0029763 Length:1126 Species:Drosophila melanogaster
Sequence 2:NP_565753.1 Gene:UBP1 / 817839 AraportID:AT2G32780 Length:1083 Species:Arabidopsis thaliana


Alignment Length:1346 Identity:265/1346 - (19%)
Similarity:414/1346 - (30%) Gaps:557/1346 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 SCQHIKKAVDAARLRRLLKSTGLLYECSQC-QKLGKTAGSAAGAGASEGAVGPGGNPVTFEFDNT 107
            ||.|..|.||..:|.:::||...: :|.:| :::....||..||...............   .|.
plant    31 SCVHFDKYVDLDKLLKIIKSYQQI-KCGECNERVHVKRGSRWGASNRRDWYSSSDQNCA---RNA 91

  Fly   108 LWLCLKCGSQLCG-----RARHKHALEHYQTPHSDSHALAMNTRSFDI-WCYECDMKICSNLRKN 166
            :||||:||..:||     .....|.:.|.:...   |.|.:..::..: ||:.|...:..:..:|
plant    92 IWLCLECGYYVCGDVGLPTEAQSHVMGHNRLTR---HRLVIQCKNPQLRWCFSCQSLLPFDNEEN 153

  Fly   167 ------LLECVELVKKLAQKPPTSTVTPSTPTISYIEEKLKAALEHLTPIVPMTGGSFDDSSSRG 225
                  |||.|:|:::.         :|:|.:.|:..|                      .|..|
plant   154 GEKKDLLLEVVKLIRER---------SPNTYSASFETE----------------------FSCSG 187

  Fly   226 SLAAAGGGGGVGSSRNRQVAIPMPPPEPSSGLSTSDSLTSVPGMAKRIDQYSATTNGNTGNKRLL 290
            |:.     ||:.:.                                  |.|:             
plant   188 SIY-----GGIEAR----------------------------------DGYA------------- 200

  Fly   291 TLETPRIENERLPRVRGLTNLGNTCFFNAVMQCLAQTPFLLSVLKELSEPGEEFILPGGTFTIKD 355
                          ||||.|||||||||:|||.|.          .|.:..|.|           
plant   201 --------------VRGLVNLGNTCFFNSVMQNLL----------SLDQLREHF----------- 230

  Fly   356 KGDIELPMIKGTLSSWGGLTAALANALEELQAGGSVF----TPRKLFDRLCVKCPQFTGGDQHDA 416
                    :|..||..|.|.::|.....|..:..|||    .||.||..:|.:.|||.|..|||:
plant   231 --------LKEDLSVSGPLVSSLKELFAESNSEASVFRNEINPRDLFFSVCSQAPQFRGYQQHDS 287

  Fly   417 HELLRQLLE--SVRNEDLKRYQRVILQNLGYKDQDVNSVSEEMRQKCKIYGNQAGDRILRP---E 476
            |||||.||:  |:....|::       .||..|.:.:|..:                  :|   :
plant   288 HELLRCLLDGLSIEESSLRK-------KLGVSDSNDSSTYQ------------------KPTLID 327

  Fly   477 QVFRGFLVSTLTCQDCHNVSSRHEYFLDMSLPVAVEKPQPPQRR--------------------- 520
            .||.|.:.||::|.:|.:.|..:|.|:|:||||...| .||:::                     
plant   328 SVFGGEISSTVSCLECGHFSKVYEPFMDLSLPVPSMK-LPPKKQQILSQAKEVLKNGAVSKDSEV 391

  Fly   521 ---KPS-------------------PELS-------LTSSSSSVTPSTGQPTINTKFTDGSVNFT 556
               ||:                   ||.|       |.|..|...|||....:|        ...
plant   392 VSAKPASDHNSTVPLFPSDHKIQSRPETSDNETDLVLLSDVSDTAPSTEAKGVN--------QIL 448

  Fly   557 ASSPSFFLHAHEAASLGPSKSQVKKEKERQRKAKRAAKKRQKSSLNLNGNDSGNGNELAESVDQD 621
            ..|....:|                  :..|..|....|....:...|...|.:|  ::..:|:.
plant   449 VGSTETLMH------------------DNDRTGKTVPDKEDVRATQSNEETSASG--ISAVIDEA 493

  Fly   622 D-ASLASLGAGDGQANDGL-EQTNGQTEDSTTSSVTTSEHSDADVEDNLVEDTAAPSTNNVPSST 684
            . .....|......||.|. |:......||....:...:|...|  |.:|.:.::       |..
plant   494 QVCGCPDLEQSSSSANQGADEELALMVADSQVLYMPYKDHLFYD--DYMVAEASS-------SFV 549

  Fly   685 ASLTAPSKTYMDSNGNAQPPGEKRDDTPEHMDKDSLEE-----DENDSGIATSPAPTATNSSTST 744
            :....|.|.|.|.:.....|..:.......:.|..:.|     |.:|....::....|::|..|:
plant   550 SGDHEPKKDYFDFSSFLDEPEIREGPVFRPLSKSEVYEAGFKADCSDDKTVSAGKGEASSSFISS 614

  Fly   745 SATGNNNSVAGSGLSGSSGALE----DPLAPASLVTAGLSEKGASVIRQVSVGAEQGASNGTEDA 805
            ....|.:.|..|.........|    .||:.:.:..||. :...|..:.||.|..: ||:....:
plant   615 DHEQNIDYVDFSSFFDEPEISERPFFRPLSKSEVSEAGF-KADCSDDKTVSAGKGE-ASSSFVSS 677

  Fly   806 DGE--------AKAIEQPE--KTP----------SQAQAMAQAQARTKRVR-------------- 836
            |.|        :...::||  :.|          |:|..|| .....|.||              
plant   678 DHEQNIDYVDFSSFFDEPEISERPFFRPLSKSEVSEAGFMA-VSGNDKTVRAGKGETFSSFMSGD 741

  Fly   837 -----------TQSYSDWSTTIAPRY-------------------------QCEDGECSVQSCLN 865
                       .:.:.|..|:..|.:                         ...|...||..||.
plant   742 NERNIDYVEFTNRIFDDRGTSERPVFGPPSKAKVSEAGFVAVSSDSDPAVLDESDSPVSVDRCLA 806

  Fly   866 NFTAVELMTGQNKVGCDSCTQRI----------------------NGSD---------------- 892
            .||..|:::..|...|::|::.:                      ||:.                
plant   807 QFTKHEILSEDNAWHCENCSKNLKLQRLREKRRTKEGLSNRWVNENGASSAFDECRDSSLNQSCI 871

  Fly   893 ---------------PKAKS--------------------------------------------- 897
                           |..|.                                             
plant   872 DLENGYKAAPPITKLPNCKEEESAIDDGFVGEENTKQAPITSVTETPLLGGETISSQPASDNECE 936

  Fly   898 -------------VNTNATKQLLVSSPPAVLILHLKRFQLGPRCIFRKLTRPVSYPNLLDIAAFC 949
                         |..:|.|::|::..|.||.:|||||....|....||:..|.:...:|::.:.
plant   937 NWEDLAVDSEEVIVKRDARKKVLINKAPPVLTIHLKRFSQDARGRVSKLSGHVDFQEFIDLSKYM 1001

  Fly   950 GSKVKNLPNIDRKQKKLLYALYGVVEHSGGMYGGHYTAYVKVRPKVAPGDKRWKFLPHGSKAELD 1014
            .::..       ::.:.:|.|.|:|||.|.|..|||.:|::                .|.|...|
plant  1002 DTRCS-------EEDEPVYRLAGLVEHLGAMSRGHYVSYIR----------------GGHKERRD 1043

  Fly  1015 QDDDQLKKLEELLAKEKAREQHLKVLDDSDDFSNSSSNSSTSDESQTPATPLEEQQTQQAQQPQQ 1079
            .|           .||                    .|||.                        
plant  1044 SD-----------TKE--------------------PNSSI------------------------ 1053

  Fly  1080 PQQLEEAANVRAPPGKWYYVSDSRVQEVSEDTALKAQAYLLFYERI 1125
                            ||:.|||:|:..|.:..|:::||:||||||
plant  1054 ----------------WYHASDSQVRPASLEEVLRSEAYILFYERI 1083

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp16-45NP_001284890.1 zf-UBP 108..159 CDD:280334 15/56 (27%)
Peptidase_C19 307..>512 CDD:271592 69/213 (32%)
Peptidase_C19K <849..1123 CDD:239132 66/409 (16%)
UBP1NP_565753.1 ZnF_UBP 83..136 CDD:197632 13/58 (22%)
UCH 201..>366 CDD:278850 72/219 (33%)
Peptidase_C19 203..>362 CDD:271592 69/212 (33%)
Peptidase_C19K <791..1081 CDD:239132 65/383 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5560
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 190 1.000 Inparanoid score I1387
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D278083at2759
OrthoFinder 1 1.000 - - FOG0002415
OrthoInspector 1 1.000 - - otm2777
orthoMCL 1 0.900 - - OOG6_103128
Panther 1 1.100 - - O PTHR24006
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2117
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.960

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