DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp16-45 and Usp45

DIOPT Version :9

Sequence 1:NP_001284890.1 Gene:Usp16-45 / 31458 FlyBaseID:FBgn0029763 Length:1126 Species:Drosophila melanogaster
Sequence 2:NP_690038.1 Gene:Usp45 / 77593 MGIID:101850 Length:813 Species:Mus musculus


Alignment Length:1146 Identity:304/1146 - (26%)
Similarity:465/1146 - (40%) Gaps:365/1146 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RDHDCSTDSGNEDLHHRKGLGSPGQSDGATPTTA--SCQHIKKAVDAARLRRLLKSTGLLYECSQ 72
            |..|.|.|...:...:::.| .|...|.:.....  :|||:..||....:::.: :..|...||:
Mouse     2 RVKDPSKDLPEKGKRNKRPL-LPHDEDSSDDIAVGLTCQHVSYAVSVNHVKKAV-AESLWSVCSE 64

  Fly    73 CQKLGKTAGSAAGAGASEGAVGPGGNPVTFEFDNTLWLCLKCGSQLCGR-ARHKHALEHYQTPHS 136
            |.|..:..               .|.||   ....:|||||||.|.||: :..:|:|.|:::..:
Mouse    65 CLKERRFC---------------DGQPV---LPADVWLCLKCGLQGCGKNSESQHSLRHFKSSGT 111

  Fly   137 DSHALAMNTRSFDIWCYECDMKICSNLRKNLL-ECVELVKKLAQKPPTSTVTPSTPTISYIEEKL 200
            :||.:.::..::.||||||:.|:.::..|.:| :.|:.::|.|.|..|...   :..|...|||.
Mouse   112 ESHCVVISLSTWVIWCYECNEKLSTHCNKKVLAQIVDFLQKHAFKTQTGAF---SRIIKLCEEKR 173

  Fly   201 KAALEHLTPIVPMTGGSFDDSSSRGSLAAAGGGGGVGSSRNRQVAIPMPPPEPSSGLSTSDSLTS 265
            :|                                                               
Mouse   174 EA--------------------------------------------------------------- 175

  Fly   266 VPGMAKRIDQYSATTNGNTGNKRLLTLETPRIENERLPRVRGLTNLGNTCFFNAVMQCLAQTPFL 330
              |..|:            |.|..           .:|.|:|:||||||||||||:|.||||..|
Mouse   176 --GEIKK------------GKKGC-----------TVPSVKGITNLGNTCFFNAVIQNLAQTYIL 215

  Fly   331 LSVLKELSEPGEEFILPGGTFTIKDKGDIELPMIKGTLSSWGGLTAAL---ANALEELQAGGSVF 392
            ..::.|:.|.|.:|     ..::.....:| |::. .|||.|.||:||   .::::|.:.|  ..
Mouse   216 FELMNEIKEDGTKF-----KISLSSAPQLE-PLVV-ELSSPGPLTSALFLFLHSMKEAEKG--PL 271

  Fly   393 TPRKLFDRLCVKCPQFTGGDQHDAHELLRQLLESVRNEDLKRYQRVILQNLGYKDQDVNSVSEEM 457
            :|:.||::||.|.|:|.|..|.|:.|||..||::||.|:.||.|..||:  .:.:....:..:|.
Mouse   272 SPKVLFNQLCQKAPRFKGFQQQDSQELLHHLLDAVRTEETKRIQASILK--AFNNPTTKTADDET 334

  Fly   458 RQKCKIYGNQAGDRILRPEQVFRGFLVSTLTCQDCHNVSSRHEYFLDMSLPVAVEKPQPP----- 517
            |:|.|.||.: |.::...:::|.|.|.||:.|::|.|:|:..:.|:|:|||:..|:...|     
Mouse   335 RKKVKAYGKE-GVKMNFIDRIFIGELTSTVMCEECANISTMKDPFIDISLPIIEERVSKPVLLGK 398

  Fly   518 -QRRKPSPELSLTSSSSSVTPSTG-QPTINTKFTDGSVNFTASSPSFFLHAHEAASLGPSKSQVK 580
             .:.:...|.....:..:||.... ||..:.|.         |||:             .|:|:.
Mouse   399 MSKCRSLQETDQDHNKGTVTVGNAHQPRASRKH---------SSPN-------------DKNQLS 441

  Fly   581 KEKERQRKAKRAAKKRQKSSLNLNGNDSGNGNELAESVDQDDASLASLGAGDGQANDGLEQTNGQ 645
            .:::..||   ...:.:|:.:....||:...:..|.::                          .
Mouse   442 HDRKHLRK---WPSEEEKTVVTHPKNDNLEASPPASTL--------------------------S 477

  Fly   646 TEDSTTSSVTTSEHSDADVEDNLVEDTAAPSTNNVPSSTASLTAPSKTYMDSNGNA-QPPGEKRD 709
            ||.|...|:|.....||.:|.::..|:.|    :.|...:......::..||.|:| |.|     
Mouse   478 TEASLNESLTDGSERDASLESSVDADSEA----SEPEIASKQPVLLRSRGDSCGHAEQHP----- 533

  Fly   710 DTPEHMDKDSLEEDENDSGIATSPAPTATNSSTSTSATGNNNSVAGSGLSGSSGALEDPLA---P 771
                |:                                                    |||   |
Mouse   534 ----HL----------------------------------------------------PLASELP 542

  Fly   772 ASLVTAGLSEKGASVIRQVSVGAEQGASNGTEDADGEAKAIEQPEKTPSQAQAMAQAQARTKRVR 836
            .:..|.|..|:.|..|.::.:   .|...|..|...|    :||...|:..     ..:..|..|
Mouse   543 QAKETHGGEEEMAEAIAELHL---SGTVTGNRDFHRE----KQPLNVPNNL-----CFSEGKHTR 595

  Fly   837 TQSYSDWSTTIAPRYQCEDGECSVQSCLNNFTAVELMTGQNKVGCDSCTQR-------INGSDPK 894
            ..|..:...|::..|.....||||||||..||::||:.|.||:.|:.||::       .:.::.|
Mouse   596 LHSAQNAFQTLSQSYVTTSKECSVQSCLYQFTSMELLMGNNKLLCEDCTEKRRKCHKETSSAEKK 660

  Fly   895 AKSVNTNATKQLLVSSPPAVLILHLKRF-QLGPRCIFRKLTRPVSYPNLLDIAAFCGSKVKNLPN 958
            |..|.|||.||||:|:.||:|||||||| |.|  ...||:.|.|.:|..||:|.||.:..||:  
Mouse   661 AGGVYTNARKQLLISAVPAILILHLKRFHQAG--LSLRKVNRHVDFPLTLDLAPFCAATCKNI-- 721

  Fly   959 IDRKQKKLLYALYGVVEHSGGMYGGHYTAYVKVRPKVAPGDKRWKFLPHGSKAELDQDDDQLKKL 1023
              ...:|:||.|||:|||||.|.|||||||||||            :|.             :||
Mouse   722 --SVGEKVLYGLYGIVEHSGSMRGGHYTAYVKVR------------VPS-------------RKL 759

  Fly  1024 EELLAKEKAREQHLKVLDDSDDFSNSSSNSSTSDESQTPATPLEEQQTQQAQQPQQPQQLEEAAN 1088
            .|.:...|.                                                     ||.
Mouse   760 SECITGRKT-----------------------------------------------------AAG 771

  Fly  1089 VRAPPGK----WYYVSDSRVQEVSEDTALKAQAYLLFYERI 1125
            ::.|.|:    |.:|||:.||.|.|..||.|||||||||||
Mouse   772 LKEPDGELGGHWVHVSDTYVQVVPESRALSAQAYLLFYERI 812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp16-45NP_001284890.1 zf-UBP 108..159 CDD:280334 21/51 (41%)
Peptidase_C19 307..>512 CDD:271592 80/207 (39%)
Peptidase_C19K <849..1123 CDD:239132 103/285 (36%)
Usp45NP_690038.1 Interaction with ERCC1. /evidence=ECO:0000305|PubMed:25538220 1..62 13/61 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 6/25 (24%)
UBP14 <72..>359 CDD:227532 111/407 (27%)
Peptidase_C19 192..>388 CDD:351799 80/207 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 405..552 41/262 (16%)
Peptidase_C19K <587..810 CDD:239132 107/306 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 288 1.000 Domainoid score I1563
eggNOG 1 0.900 - - E1_COG5560
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 413 1.000 Inparanoid score I1826
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG47475
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002415
OrthoInspector 1 1.000 - - otm43521
orthoMCL 1 0.900 - - OOG6_103128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5847
SonicParanoid 1 1.000 - - X2117
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.760

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