DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp16-45 and Usp20

DIOPT Version :10

Sequence 1:NP_572220.1 Gene:Usp16-45 / 31458 FlyBaseID:FBgn0029763 Length:1126 Species:Drosophila melanogaster
Sequence 2:NP_083122.1 Gene:Usp20 / 74270 MGIID:1921520 Length:916 Species:Mus musculus


Alignment Length:1144 Identity:214/1144 - (18%)
Similarity:319/1144 - (27%) Gaps:529/1144 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 CQHIKKAVDAARLRRLLKSTGLLYECSQCQKLGKTAGSAAGAGASEGAVGPGGNPVTFEFDNTLW 109
            |.|:....:..:...||||.|   .|..|                 |..||           .||
Mouse     8 CPHLDCIGEVTKEDLLLKSKG---TCQSC-----------------GVAGP-----------NLW 41

  Fly   110 LCLK--CGSQLCGRARHKHALEHYQTPHSDSHALAMNTRSFDIWCYECDMKICSNLRKNLLECVE 172
            .||:  |....||.:...|:..|.|.   ..|.|.:|..:|.:|||.|:.::             
Mouse    42 ACLQVTCPYVGCGESFADHSSIHAQV---KKHNLTVNLTTFRVWCYACEREV------------- 90

  Fly   173 LVKKLAQKPPTSTVTPSTPTISYIEEKLKAALEHLTPIVPMTGGSFDDSSSRGSLAAAGGGGGVG 237
                                  ::|::|..   ||                             .
Mouse    91 ----------------------FLEQRLAV---HL-----------------------------A 101

  Fly   238 SSRNRQVAIPMPPPEPSSGLSTSDSLTSVPGMAKRIDQYSATTNGNTGNKRLLTLETPRIENERL 302
            ||..|......|||        |..|.:||        .:....|          |:...:::..
Mouse   102 SSSARLSEQDSPPP--------SHPLKAVP--------IAVADEG----------ESESEDDDLK 140

  Fly   303 PR-VRGLTNLGNTCFFNAVMQCLAQTPFLLSVLKELSEPGEEFILPGGTFTIKDKGDIELPMIKG 366
            || :.|:.||||:|:.||.:|.|:..|           |..:|.|..|.....||          
Mouse   141 PRGLTGMKNLGNSCYMNAALQALSNCP-----------PLTQFFLECGGLVRTDK---------- 184

  Fly   367 TLSSWGGLTAALANALEEL------QAGGSVFTPRKLFDRLCVKCPQFTGGDQHDAHELLRQLLE 425
                    ..||..:.::|      :...|...|..|...:.:..|.|.|..|.|..|.||.|::
Mouse   185 --------KPALCKSYQKLISEVWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLMD 241

  Fly   426 SVRNEDLKRYQRVILQNL-GYKDQDVNSVSEEMRQKCKIYGNQAGDRILRPEQVFRGFLVSTLTC 489
            .: :|:||......:..| ..:|.| :|.::|.|.         ||                   
Mouse   242 QL-HEELKEPMVAAVAALTDARDSD-SSDTDERRD---------GD------------------- 276

  Fly   490 QDCHNVSSRHEYFLDMSLPVAVEKPQPPQRRKPSPELSLTSSSSSVTPSTGQPTINTKFTDGSVN 554
                                          |.||.:..|:..|||   ..|:       .||   
Mouse   277 ------------------------------RSPSEDEFLSCDSSS---DRGE-------GDG--- 298

  Fly   555 FTASSPSFFLHAHEAASLGPSKSQVK-----------KEKERQRKAKRAAKKRQKSSLNLNGNDS 608
                         :....|.||::::           .||||.:..|.:..:::.:|        
Mouse   299 -------------QGRGGGSSKAEMELLISDEAGRAISEKERMKDRKFSWGQQRTNS-------- 342

  Fly   609 GNGNELAESVDQD---DASLASLGAGDGQANDGLEQTNGQTEDSTTSSVTTSEHSDADVEDNLVE 670
                   |.||:|   |.::|||                                     |....
Mouse   343 -------EQVDEDADVDTAMASL-------------------------------------DEQSR 363

  Fly   671 DTAAPSTNNVPSSTASLTAPSKTYMDSNGNAQPPGEKRDDTPEHMDKDSLEEDENDSGIATSP-- 733
            :...||    |.||:....|     :.:..|......|..:|.|      ...|..|.:::||  
Mouse   364 EAQPPS----PRSTSPCQTP-----EPDNEAHIRSSSRPCSPVH------HHHEGHSKLSSSPPR 413

  Fly   734 ------APTATNSSTSTSATGNN-------NSVAGSGLSGSSGALEDPLA------------PAS 773
                  .|:.........:||..       .||.....:||..:|...|.            ..|
Mouse   414 ASPVRMGPSYVLKKAQVPSTGGRRRKEQSYRSVISDVFNGSVLSLVQCLTCDRVSTTVETFQDLS 478

  Fly   774 LVTAGLSE--KGASVIRQVSVGAEQGASNGTEDADG-EAKAIEQPEK-----TPSQAQAMAQAQA 830
            |...|..:  |..|.|.| :|.|:.||...:..:.| .|..:|...:     |||..        
Mouse   479 LPIPGKEDLAKLHSAIYQ-NVPAKPGACGDSYSSQGWLAFIVEYIRRFVVSCTPSWF-------- 534

  Fly   831 RTKRVRTQSYSDWSTTIAPRYQCEDGECSVQSCLNNFTAVELMTGQNKVGCDSCTQRINGSDPKA 895
                        |...:           :::.||..|.|.:.:.|.|...|:.|.:..||     
Mouse   535 ------------WGPVV-----------TLEDCLAAFFAADELKGDNMYSCERCKKLRNG----- 571

  Fly   896 KSVNTNATKQLLVSSPPAVLILHLKRFQLGPRCIFRKLTRPVSYP-NLLDIAAF----CGSKVKN 955
                   .|...|...|.:|.:|||||:......| |::..||:| ..||:..|    |.|:|..
Mouse   572 -------VKYCKVLCLPEILCVHLKRFRHEVMYSF-KVSSHVSFPLEGLDLRPFLAKECTSQVTT 628

  Fly   956 LPNIDRKQKKLLYALYGVVEHSGGMYGGHYTAYVKVRPKVAPGDKRWKFLPHGSKAELDQDDDQL 1020
                        |.|..|:.|.|....|||.||.:                              
Mouse   629 ------------YDLLSVICHHGTAGSGHYIAYCQ------------------------------ 651

  Fly  1021 KKLEELLAKEKAREQHLKVLDDSDDFSNSSSNSSTSDESQTPATPLEEQQTQQAQQPQQPQQLEE 1085
                             .|::                                            
Mouse   652 -----------------NVIN-------------------------------------------- 655

  Fly  1086 AANVRAPPGKWYYVSDSRVQEVSEDTALKAQAYLLFYER 1124
                    |:||...|..|.||.|......:||:|||.:
Mouse   656 --------GQWYEFDDQYVTEVHETVVQNVEAYVLFYRK 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp16-45NP_572220.1 zf-UBP 108..159 CDD:460464 18/52 (35%)
UBP12 <307..990 CDD:227847 152/743 (20%)
Peptidase_C19 307..>512 CDD:470612 43/211 (20%)
Peptidase_C19K <849..1123 CDD:239132 53/278 (19%)
Usp20NP_083122.1 zf-UBP 30..90 CDD:460464 23/90 (26%)
UBP12 <73..688 CDD:227847 190/1045 (18%)
UCH 145..684 CDD:425685 164/876 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 258..420 50/313 (16%)
DUSP 704..787 CDD:197831
DUSP 812..896 CDD:197831
Blue background indicates that the domain is not in the aligned region.

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