DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp16-45 and usp16

DIOPT Version :10

Sequence 1:NP_572220.1 Gene:Usp16-45 / 31458 FlyBaseID:FBgn0029763 Length:1126 Species:Drosophila melanogaster
Sequence 2:NP_001139569.1 Gene:usp16 / 569700 ZFINID:ZDB-GENE-030131-4153 Length:815 Species:Danio rerio


Alignment Length:1154 Identity:297/1154 - (25%)
Similarity:442/1154 - (38%) Gaps:369/1154 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVKKRQADSRDHDCSTDSGNEDLHHRKGLGSPGQSDGATPTTASCQHIKKAVDAARLRRLLKSTG 65
            |.||:   .:|....|||.:|.               |.|   ||.||:|..:    ..:||...
Zfish     1 MGKKK---VKDRSAGTDSSSET---------------AGP---SCTHIRKGTE----NSVLKKAC 40

  Fly    66 LLYECSQCQKL------------GKTAGSAAGAGASEGAVGPGGNPVTFEFDNTLWLCLKCGSQL 118
            |....|.||..            .:|.|.:.                      .:|:|||||.:.
Zfish    41 LNEHWSSCQDCEQDKPEEKQILEDQTDGESP----------------------AVWMCLKCGHRG 83

  Fly   119 CGRARHKHALEHYQTPHSDSHALAMNTRSFDIWCYECD-----------MKICSNLRKNLLECVE 172
            |||:.::||::||:||.|:.|.|.::...:.:|||.||           .::.:|:||.:|...:
Zfish    84 CGRSGNQHAIKHYETPRSEPHCLVLSLDVWSVWCYICDDEVQYSSTGQLAQLITNIRKQVLTAPD 148

  Fly   173 L--VKKLAQKPPTSTVTPSTPTISYIEEKLKAALEHLTPIVPMTGGSFDDSSSRGSLAAAGGGGG 235
            .  ..|.:.|...|.:..:..|..  |||.|...:        ...|..:.|.:...:||.|...
Zfish   149 KRNASKKSWKEDISVMNSAEQTQD--EEKGKKGKQ--------KSSSKQEDSPKSHQSAAAGSSA 203

  Fly   236 VGSSRNRQVAIPMPPPEPSSGLSTSDSLTSVPGMAKRIDQYSATTNGNTGNKRLLTLETPRIENE 300
            |.|                                                              
Zfish   204 VVS-------------------------------------------------------------- 206

  Fly   301 RLPRVRGLTNLGNTCFFNAVMQCLAQTPFLLSVLKELSEPGEEFILPGGTFTIKDKGDIELPMIK 365
                ||||:|||||||||||:|.|:||.:|..:||:::|       ...:|:|......||..::
Zfish   207 ----VRGLSNLGNTCFFNAVVQSLSQTQYLRELLKQIAE-------EKSSFSITPALSSELDPLQ 260

  Fly   366 GTLSSWGGLTAALANALEELQ-AGGSVFTPRKLFDRLCVKCPQFTGGDQHDAHELLRQLLESVRN 429
            ..|...|.||.|:...:.|:| ....|.||::||.::|.|.|:|.|..|.|:.||||.||:.:|.
Zfish   261 IQLERPGSLTLAMCQLMNEIQETKKGVVTPKELFTQVCKKAPRFKGFQQQDSQELLRYLLDGMRA 325

  Fly   430 EDLKRYQRVILQNLGYKDQDVNSVSEEMRQKCKIYGNQAGDRILRPEQVFRGFLVSTLTCQDCHN 494
            |:.||....||:.|  |....|..:|:.::..|.|......:.. .::||.|.:.||:.|::|..
Zfish   326 EEAKRVNSGILEAL--KSSGKNFEAEQTKKIVKEYEKDGAPKNF-VDRVFGGAMSSTVMCKECKT 387

  Fly   495 VSSRHEYFLDMSLPVAVEKPQPPQRRKPSPELSLTSSSSSVTPSTGQPTINTKFTDGSVNFTASS 559
            ||...|.|||:|||||.|..:...::|      ......||:....|.|  :...:|:.:....:
Zfish   388 VSLVTEMFLDLSLPVADEAYRKKNQKK------AVQHRHSVSDDGDQDT--SSLANGNEDMPTGT 444

  Fly   560 PSFFLHAHEAASLGPSKSQVKKEKERQRKAKRAAKKRQKSSLNLNGNDSGNGNELAESVDQDDAS 624
            .|.:...       .:|.|.||:.:.||   |..|:..|.:|:...|.|        |.|..|:|
Zfish   445 GSKYQQK-------KAKKQAKKQAKNQR---RQQKQGGKVTLDAITNQS--------STDPADSS 491

  Fly   625 LASLGAG-DGQANDGLEQTNGQTEDSTTSSVTTSEHSDADVEDNLVEDTAAPSTNNVPSSTASLT 688
            :.:.... :|.|       :.|..|:....::..:|:: |.:|...|...|.|.||      ..|
Zfish   492 MQTQTVSVNGSA-------DAQPADTNQEDLSLEKHNE-DQDDEEPEQEQAASVNN------RFT 542

  Fly   689 APSKTYMDSNGNAQPPGEKRDDTPEHMDKDSLEEDENDSGIATSPAPTATNSSTSTSATGNNNSV 753
            |.|:            .:..:|..|.:::|   |||.:...|                       
Zfish   543 ALSE------------DQTTEDIAEQVNED---EDEIEQNCA----------------------- 569

  Fly   754 AGSGLSGSSGALEDPLAPASLVTAGLSEKGASVIRQVSVGAEQGASNGTEDADGEAKAIEQPEKT 818
                   ....|.:.|...||.|.                :|....|| ||...:.|......:.
Zfish   570 -------EEEELVEELNTMSLTTP----------------SEGDVENG-EDTLEDVKEYTVVNRD 610

  Fly   819 PSQA-QAMAQAQARTKRVRTQSYSDWSTTIAPRYQCEDGECSVQSCLNNFTAVELMTGQNKVGCD 882
            |..| :|:|...|..|:                      ||||:|||..||.||.:|..|::.|.
Zfish   611 PELAFRALASRTAPVKQ----------------------ECSVESCLYQFTEVEHLTENNRLMCV 653

  Fly   883 SCTQRING-SDPKAKSVNTNATKQLLVSSPPAVLILHLKRFQLGPRCIFRKLTRPVSYPNLLDIA 946
            :||::..| .|...|:|..:|.||:|:|.||.||.|||||||.....:. |:.|.|.:|.:||:|
Zfish   654 TCTKQQPGYKDGCKKAVYRDALKQMLISDPPVVLTLHLKRFQQVAYSVC-KVNRHVQFPQILDLA 717

  Fly   947 AFCGSKVKNLPNIDRKQKKLLYALYGVVEHSGGMYGGHYTAYVKVRPKVAPGDKRWKFLPHGSKA 1011
            .||.   .|...:...:.::||:|||:|||||.|..||||||||.||..                
Zfish   718 PFCS---LNCTGVKEGETQVLYSLYGIVEHSGTMRSGHYTAYVKSRPST---------------- 763

  Fly  1012 ELDQDDDQLKKLEELLAKEKAREQHLKVLDDSDDFSNSSSNSSTSDESQTPATPLEEQQTQQAQQ 1076
                                               .|...|.:.:                    
Zfish   764 -----------------------------------HNCVQNGTAA-------------------- 773

  Fly  1077 PQQPQQLEEAANVRAPPGKWYYVSDSRVQEVSEDTALKAQAYLLFYERI 1125
                    .:.:..|..|.|:::|||.|..|.|.....:||||||||:|
Zfish   774 --------ASGDAEASKGSWFHISDSSVHPVPEAKVQSSQAYLLFYEKI 814

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp16-45NP_572220.1 zf-UBP 108..159 CDD:460464 23/61 (38%)
UBP12 <307..990 CDD:227847 206/686 (30%)
Peptidase_C19 307..>512 CDD:470612 80/205 (39%)
Peptidase_C19K <849..1123 CDD:239132 84/274 (31%)
usp16NP_001139569.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 12/46 (26%)
zf-UBP 73..124 CDD:460464 23/50 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 148..200 12/61 (20%)
UBP12 <209..813 CDD:227847 228/820 (28%)
Peptidase_C19 209..>406 CDD:470612 80/206 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 411..510 26/131 (20%)
Peptidase_C19K <624..812 CDD:239132 85/292 (29%)

Return to query results.
Submit another query.