DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp16-45 and usp11

DIOPT Version :9

Sequence 1:NP_001284890.1 Gene:Usp16-45 / 31458 FlyBaseID:FBgn0029763 Length:1126 Species:Drosophila melanogaster
Sequence 2:XP_002663119.3 Gene:usp11 / 568334 ZFINID:ZDB-GENE-081104-421 Length:990 Species:Danio rerio


Alignment Length:939 Identity:205/939 - (21%)
Similarity:315/939 - (33%) Gaps:347/939 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 PRVRGLTNLGNTCFFNAVMQCLAQTP-----FLLSV-LKELSEPGEEFILPGGTFTIKDKGDIEL 361
            |.|.||||||||||.|:.:|||:.||     ||.:: |:||:     |..|.|.     ||:|  
Zfish   239 PGVCGLTNLGNTCFMNSALQCLSNTPPLTEYFLKNLYLEELN-----FSNPLGM-----KGEI-- 291

  Fly   362 PMIKGTLSSWGGLTAALANALEELQAGG--SVFTPRKLFDRLCVKCPQFTGGDQHDAHELLRQLL 424
                         ..|.|:.::::.:|.  || .||....::.....||.|..|||:.|||..||
Zfish   292 -------------AEAYADVIKQMWSGRHYSV-VPRVFKTKVGHFASQFLGYQQHDSQELLSFLL 342

  Fly   425 ESVRNEDLKRYQR---VILQNL-GYKDQDVNSVSEEMRQKCKIYGNQAGDRILRPEQVFRGFLVS 485
            :.: :|||.|.::   :.|::. |..||:|  ..|..|...:     ..|.::  ...|.|...|
Zfish   343 DGL-HEDLNRVKKKEYIELRDADGRPDQEV--AEEAWRNHLR-----RNDSVI--VDTFHGLFKS 397

  Fly   486 TLTCQDCHNVSSRHEYFLDMSLPVAVEK--------------PQPPQRRKPSPELS-LTSSSSSV 535
            ||.|.:|:.||...:.|..:|:|:.|.|              .:|.|.|...|:.. :....:::
Zfish   398 TLVCPECNKVSVTFDPFCYLSVPLPVSKERVMEVFYVSLDPTAKPTQYRLIVPKAGRVLDLCTAL 462

  Fly   536 TPSTGQP--------TINTKF-----TDGSVN----------FTASS------------------ 559
            :.:||.|        ..|.:|     :|.|::          :..||                  
Zfish   463 SQATGVPPNQMTVTDVFNHRFYRIYQSDESLSCILDRDDIFVYQLSSGCVDEDSDEVVLSIYMRE 527

  Fly   560 ---------------PSFFLH------------------------AHEAASLGPSKSQVKKEKER 585
                           .|.|.|                        |.....|.||:...::|::.
Zfish   528 RSHYRDYGSGSNSYGTSLFGHPLRMSVPRAHCTPEHLYQLLLERLARYVRPLDPSEEVEEEEEDD 592

  Fly   586 QRKAKRAAKKRQKSSLNLNGNDSGNGNELAESVDQDDASLASLGAGDGQANDGLEQTNGQTEDST 650
            :.:..:|         ..||.....|.|     |.::|..:........:|:..||.|||:|.|.
Zfish   593 EEELYKA---------QTNGVSDDEGEE-----DSEEAGSSKKEEEPRASNEVNEQNNGQSEASP 643

  Fly   651 TSSVTTSEHSDADVEDNLVEDTAAPSTNNVPSSTASLTAPSKTYMDSNGNAQPPGEKRDDTPEHM 715
            :|    .....|:.|::..|.....||....|:..|   ...|..|.:..|:|.|::.|:     
Zfish   644 SS----EGEERAEEEESSSEQERGSSTEEGQSACGS---TDTTDGDQSAGAEPSGKEEDE----- 696

  Fly   716 DKDSLEEDENDSGIATSPAPTATNSSTSTSATGNNNSVAGSGLSGSSGALEDPLAPASLVTAGLS 780
                 :|:|.|...|.|..|...........|...                              
Zfish   697 -----DEEEEDGEEAASCTPANKRHPGRRRYTERR------------------------------ 726

  Fly   781 EKGASVIRQVSVGAEQGASNGT-----EDADGEAKAIEQP----EKTPSQAQAMAQAQARTKRVR 836
            :|....|:.|:       ||||     .:|.|......||    :..|...:.........|.::
Zfish   727 KKALFTIQAVN-------SNGTTERGMAEAGGSISFSSQPYIAIDWDPDMKKKYYNENEAEKYIK 784

  Fly   837 TQSYSDWSTTIAPRYQCEDGECSVQSCLNNFTAVELMTGQNKVGCDSCTQRINGSDPKAKSVNTN 901
            .||..      .|..|.   ...:|.|:..||.||.:..:|...|.:|.:            :..
Zfish   785 HQSMD------VPHQQT---TVQLQECIELFTTVETLEEENPWYCPTCKR------------HQL 828

  Fly   902 ATKQLLVSSPPAVLILHLKRFQLGPRCIFRKLTRPVSYP-NLLDIAAFCGSKVKNLPNIDRKQKK 965
            |||:|.:.|.|.|||:|||||.. .:....||...|.:| ..||.:.|...|     .::..:..
Zfish   829 ATKKLDLWSLPEVLIIHLKRFSY-TKYSREKLDTIVEFPLRDLDFSGFLLKK-----TVNSTEPP 887

  Fly   966 LLYALYGVVEHSGGMYGGHYTAYVKVRPKVAPGDKRWKFLPHGSKAELDQDDDQLKKLEELLAKE 1030
            ..|.|..|..|.||:..||||:|.:                       ::|:             
Zfish   888 CPYDLISVSNHYGGLRDGHYTSYAR-----------------------NKDN------------- 916

  Fly  1031 KAREQHLKVLDDSDDFSNSSSNSSTSDESQTPATPLEEQQTQQAQQPQQPQQLEEAANVRAPPGK 1095
                                                                           |:
Zfish   917 ---------------------------------------------------------------GQ 918

  Fly  1096 WYYVSDSRVQEVSEDTALKAQAYLLFYER 1124
            |||..||:|....|:..:.:.||||||:|
Zfish   919 WYYFDDSKVTYAREEQIVTSAAYLLFYQR 947

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp16-45NP_001284890.1 zf-UBP 108..159 CDD:280334
Peptidase_C19 307..>512 CDD:271592 69/216 (32%)
Peptidase_C19K <849..1123 CDD:239132 58/274 (21%)
usp11XP_002663119.3 UBP12 15..947 CDD:227847 204/937 (22%)
DUSP 34..119 CDD:283896
Ubiquitin_3 133..219 CDD:291502
Peptidase_C19 242..>419 CDD:271592 67/212 (32%)
USP7_C2 413..>504 CDD:291217 16/90 (18%)
Peptidase_C19R <793..946 CDD:239139 57/272 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5560
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.