DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp16-45 and usp45

DIOPT Version :9

Sequence 1:NP_001284890.1 Gene:Usp16-45 / 31458 FlyBaseID:FBgn0029763 Length:1126 Species:Drosophila melanogaster
Sequence 2:XP_005158432.1 Gene:usp45 / 564004 ZFINID:ZDB-GENE-100211-2 Length:803 Species:Danio rerio


Alignment Length:1134 Identity:292/1134 - (25%)
Similarity:469/1134 - (41%) Gaps:374/1134 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RDHDCSTDSGNEDLHHRKGLGSPGQSDGATPTTASCQHIKKAVDAARLRRLLKSTGLLYE-CSQC 73
            ||.|.|.:.|        ||              :|||:.:|||.:.:::.:  ||.|:. ||.|
Zfish    25 RDEDSSDEVG--------GL--------------TCQHVSRAVDLSSVKKAV--TGSLWSVCSDC 65

  Fly    74 QK-----LGKTAGSAAGAGASEGAVGPGGNPVTFEFDNTLWLCLKCGSQLCGRARHKHALEHYQT 133
            .|     .|:|||:                       :.:.:|||||.|.|.:|..:|:.:|.|.
Zfish    66 LKERNVLEGETAGA-----------------------HDILVCLKCGFQGCNQAEVQHSTKHQQA 107

  Fly   134 PHSDSHALAMNTRSFDIWCYECDMKICSNLRKNLLECVELVKKLAQKPPTSTVTPSTPTISYIEE 198
            .|||||.:.::..::..||:||..::.::..|         |.|||            |:.::::
Zfish   108 HHSDSHCITISLTTWKAWCFECKEELSTHCNK---------KALAQ------------TLDFLQK 151

  Fly   199 KLKAALEHLTPIVPMTGGSFDDSSSRGSLAAAGGGGGVGSSRNRQVAIPMPPPEPSSGLSTSDSL 263
            :                                                       |..:||.:.
Zfish   152 Q-------------------------------------------------------SAKATSGTS 161

  Fly   264 TSVPGMAKRIDQYSATTNGNTGNKRLLTLETPRIENERLPRVRGLTNLGNTCFFNAVMQCLAQTP 328
            :.:..:.:...:|..|..|          ::|  .|..|..|:|:.|||||||||||||.|:||.
Zfish   162 SKLIKLREEPAEYVDTQRG----------KSP--VNSTLIPVKGINNLGNTCFFNAVMQNLSQTH 214

  Fly   329 FLLSVLKELSEPGEEFILPGGTFTIKDKGDIELPMIKGTLSSWGGLTAALANALEEL-QAGGSVF 392
            .|..:::::.|.|.:..:...|.|       .|..:..||.|...||:|:...|:.: ::|....
Zfish   215 MLNDLIQDVKEKGHKMKISPSTET-------NLGSLTVTLPSPEPLTSAMFLFLQSMKESGKGPV 272

  Fly   393 TPRKLFDRLCVKCPQFTGGDQHDAHELLRQLLESVRNEDLKRYQRVILQNLGYKDQDVNSVSEEM 457
            :|:.||::||.|.|:|.|..|.|:.|||..||:|:|.|:.||.:..||:  .:.:....:..||.
Zfish   273 SPKILFNQLCQKAPRFKGYQQQDSQELLHYLLDSMRVEETKRIKAGILK--AFNNPTEKTADEET 335

  Fly   458 RQKCKIYGNQAGDRILRPEQVFRGFLVSTLTCQDCHNVSSRHEYFLDMSLPV---AVEKPQPPQR 519
            :::.|.||.: |.::...:::|.|.|.||:.|::|.::|:..|.|:|:|||:   .:.||..|.|
Zfish   336 KRQVKAYGKE-GVKLNFVDRIFVGELTSTIMCEECEHISTVKEAFIDISLPIIEERISKPTNPAR 399

  Fly   520 --RKPSPELSLTSSSSSVTPSTGQPTINTKFTDGSVNFTASSPSFFLHAHEAASLGPSKSQVKKE 582
              :....:.||||...|                             |.||..|:           
Zfish   400 LGKSGREQDSLTSHDDS-----------------------------LAAHSQAN----------- 424

  Fly   583 KERQRKAKRAAKKRQKSSLNLNGNDSGNGNELAESVDQDDASLASLGAGDGQANDGLEQTNGQTE 647
                |.::|.:.::.:|..:...:|. .|.:...|..::|..:|..|.                 
Zfish   425 ----RNSRRLSGQKLQSRHSSTSHDD-RGPDTVSSRQEEDLCVAGRGL----------------- 467

  Fly   648 DSTTSSVTTSEHSDADVEDNLVEDTAAPSTNNVPSSTASLTAPSKTYMDSNGNAQPPGEKRDDTP 712
             |:..:.|....||...:::.::|::..:.:....|..|...||.:...|..             
Zfish   468 -SSYRTDTMGSQSDCSEKESNLQDSSNDADSEASESEWSPRIPSVSSHSSTS------------- 518

  Fly   713 EHMDKDSLEEDENDSGIATSPAPTATNSSTSTSATGNNNSVAGSGLSGSSGALEDPLAPASLVTA 777
               ||.|:                    :|:.|.|.:|.|:..:              |:|....
Zfish   519 ---DKTSI--------------------TTTLSTTTHNPSLKSN--------------PSSTPLP 546

  Fly   778 GL-SEKGASVIRQVSVGAEQGASNGTEDADGEAKAIEQPEKTPSQAQAMAQAQARTKRVRTQSYS 841
            .: .::|.:|.:.||..::.|..:.:.|....:.:.|:..:|..:.:   |......:|...||:
Zfish   547 SIRPQQGGAVEQLVSAVSKLGLVHTSTDTLPISHSQEELSETRDRDR---QHHQGAFQVLCHSYT 608

  Fly   842 DWSTTIAPRYQCEDGECSVQSCLNNFTAVELMTGQNKVGCDSCTQR----INGSDPKAKSVNTNA 902
            ..|.           ||||||||:.||::||:.|.||:.|::||.|    :..||.||:.|.|:|
Zfish   609 PSSK-----------ECSVQSCLHQFTSIELLMGNNKLLCENCTDRRQRQMKRSDKKAEKVYTSA 662

  Fly   903 TKQLLVSSPPAVLILHLKRF-QLGPRCIFRKLTRPVSYPNLLDIAAFCGSKVKNLPNIDRKQKKL 966
            .||:|:|:.|.|:.|||||| |.|..  .||:.|.|.:|.|||:|.||.:..|||.:.:|    :
Zfish   663 RKQMLISALPPVVTLHLKRFHQAGMN--LRKVNRHVDFPLLLDLAPFCSATCKNLGSGER----V 721

  Fly   967 LYALYGVVEHSGGMYGGHYTAYVKVRPKVAPGDKRWKFLPHGSKAELDQDDDQLKKLEELLAKEK 1031
            ||:|||:|||||.|.||||.||||||                                       
Zfish   722 LYSLYGIVEHSGSMRGGHYAAYVKVR--------------------------------------- 747

  Fly  1032 AREQHLKVLDDSDDFSNSSSNSSTSDESQTPATPLEEQQTQQAQQPQQPQQLEEAANVRAPPGKW 1096
                                         ||....|:::.|...:        ||.:  ||.|:|
Zfish   748 -----------------------------TPQRKPEQRRNQSGSR--------EACS--APQGQW 773

  Fly  1097 YYVSDSRVQEVSEDTALKAQAYLLFYERI 1125
            .||||:.||.|.|...|.:||||||||.:
Zfish   774 VYVSDTTVQTVPESRVLNSQAYLLFYEEL 802

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp16-45NP_001284890.1 zf-UBP 108..159 CDD:280334 20/50 (40%)
Peptidase_C19 307..>512 CDD:271592 74/208 (36%)
Peptidase_C19K <849..1123 CDD:239132 101/278 (36%)
usp45XP_005158432.1 UBP14 16..>329 CDD:227532 114/447 (26%)
UBP12 <193..800 CDD:227847 230/827 (28%)
Peptidase_C19 193..>389 CDD:351799 74/205 (36%)
Peptidase_C19K <606..800 CDD:239132 104/288 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 232 1.000 Domainoid score I2351
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 276 1.000 Inparanoid score I2923
OMA 1 1.010 - - QHG47475
OrthoDB 1 1.010 - - D278083at2759
OrthoFinder 1 1.000 - - FOG0002415
OrthoInspector 1 1.000 - - otm25379
orthoMCL 1 0.900 - - OOG6_103128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5847
SonicParanoid 1 1.000 - - X2117
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.910

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