DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp16-45 and usp32

DIOPT Version :9

Sequence 1:NP_001284890.1 Gene:Usp16-45 / 31458 FlyBaseID:FBgn0029763 Length:1126 Species:Drosophila melanogaster
Sequence 2:XP_686236.6 Gene:usp32 / 557981 ZFINID:ZDB-GENE-100210-5 Length:1585 Species:Danio rerio


Alignment Length:998 Identity:204/998 - (20%)
Similarity:316/998 - (31%) Gaps:340/998 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   296 RIENERLPRVR---GLTNLGNTCFFNAVMQCLAQTPFLLSVLKELSEPGEEFILPGGTFTIKDKG 357
            :|:..::|..:   ||:|||||||.|:.:||::.|           :|..|:.:.|.        
Zfish   721 KIDRHKVPTEKGATGLSNLGNTCFMNSSIQCVSNT-----------KPLTEYFISGR-------- 766

  Fly   358 DIELPMIKGT--LSSWGGLTAALANALEELQAGGSV-FTPRKLFDRLCVKCPQFTGGDQHDAHEL 419
              .|..:..|  :...|.:.....:.::||.:|... ..|.||...:....|:|.|..|.|:.||
Zfish   767 --HLYELNRTNPIGMRGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQEL 829

  Fly   420 LRQLLESVRNEDLKRYQRVILQNLGYKDQDVNSVSEEMRQKCKIYGNQAGDRILRPEQ-----VF 479
            |..||:.: :|||.|........|  ||.|.....|        ...:|.:..||..:     :|
Zfish   830 LAFLLDGL-HEDLNRVHEKPYVEL--KDSDGRPDHE--------VATEAWENHLRRNRSIVVDLF 883

  Fly   480 RGFLVSTLTCQDCHNVSSRHEYFLDMSLPVAVEKPQPPQRRKPSPELSLTSSSSSVTPSTGQPTI 544
            .|.|.|.:.|:.|.::|:|.:.|..:|||:.::.         |..|.:|               
Zfish   884 HGQLRSQVKCKTCGHISARFDPFNFLSLPLPMDS---------SMHLEIT--------------- 924

  Fly   545 NTKFTDGSVNFTASSPSFFLHAHEAASLGPSKSQVKKEKERQRKAKRAAKKRQKSSLNLNGNDSG 609
                   .:....|:|                                  .|....||::....|
Zfish   925 -------VIKLDGSTP----------------------------------VRYGLRLNMDEKYMG 948

  Fly   610 NGNELAESVDQDDASLASLGAGDGQANDGLEQTNGQTEDSTTSSVTTSEHSDADVEDNLVEDTAA 674
            ...:|:|        |.||                :.|....:.|.||...:..:::..|..   
Zfish   949 LKKQLSE--------LCSL----------------KPEQILLAEVHTSNIKNFPLDNQKVRH--- 986

  Fly   675 PSTNN--------VPSSTASLTAPSKTYMD--SNGNAQ----------PPGEKRDDTPEHMDKDS 719
             |.|.        ||.|..|:|:|.:|...  :||.|.          |.|......|..::|..
Zfish   987 -SVNGFLCAFEIPVPGSPTSVTSPVQTEKPPIANGTAGNNHIGKSGLIPNGMPSTVVPCTLEKPL 1050

  Fly   720 LEEDENDSGIATSPAP-----------TATNSSTSTSATGNNNSVAGSGLSGSSGALEDPLAPAS 773
            .....|...:....:|           .........|:..|..|:.|..|          :.|.:
Zfish  1051 ANGIPNGHAVPVQDSPFIGYIIAMHRKMMRTELYFLSSQKNRPSLFGMPL----------IVPCT 1105

  Fly   774 LVTAGLSEKG------ASVIRQVSVGAEQGASNGTEDA-----------------DGEAKA---- 811
            :.|   |:|.      ..|.|..|....|.|||..:|.                 ||.:.|    
Zfish  1106 VHT---SKKDLYDAVWIQVSRLASPLPPQEASNHAQDCDDSLGYQYPFTLRVVQKDGNSCAWCPW 1167

  Fly   812 --------IEQPEKTPSQAQAMAQAQARTKRVRTQSYSDWS-TTIAPRYQ--------------- 852
                    ::..|...|...|....             ||. |.:..|||               
Zfish  1168 YRFCRGCTVDCNEDRASLGNAYIAV-------------DWDPTALHLRYQTSQERIVEEHPSVEQ 1219

  Fly   853 ---CEDGECSVQSCLNNFTAVELMTGQNKVGCDSC-TQRINGSDPKAKSVNTNATKQLLVSSPPA 913
               .:....|:.|||..||:.|.:.......|..| |.|:             |||:|.:...|.
Zfish  1220 SRRAQAEPISLDSCLKAFTSEEELGEDELYYCSKCKTHRL-------------ATKKLDLWRLPP 1271

  Fly   914 VLILHLKRFQ-LGPRCIFRKLTRPVSYP-NLLDIAAFCGSK--VKNLPNIDRKQKKLLYALYGVV 974
            |||:|||||| :..|.|  |..:.|.:| ...|.:||...:  .::|.::...|.:.|......:
Zfish  1272 VLIVHLKRFQFVNGRWI--KSQKIVKFPRESFDPSAFLAPREVSQSLGSLQSLQSECLVEELQRL 1334

  Fly   975 EHSGGMYGGHYTAYVKVRP---KVAP-----------------------GDKRWKF-LPH-GSKA 1011
            |..........|..:...|   :..|                       |.|:.:. ||. ||:.
Zfish  1335 ERGDSSVSSISTTTLASPPISGRATPCSIRRVGSPLSRNSSPGSSPRNTGRKQGRLRLPQLGSRH 1399

  Fly  1012 ELDQDDDQLKKLEELLAKEKAREQHLKVLDDSDDFSNSSSNSST-------------------SD 1057
            .|....:.|:...  ..||...|.....:.|.::.:..::...|                   .|
Zfish  1400 RLCNSKENLEACS--TNKESESEAEQSAVTDGENLTPDANTQDTWSLDASSNDCDVIMVNGLGQD 1462

  Fly  1058 ESQTPATPLEEQQTQQAQQPQQPQQ--LEEAANVRA-------------------PPGKWYYVSD 1101
            .||:..   ..:.:.....|.|...  ||...|:.|                   |..|||..:|
Zfish  1463 SSQSNG---HSEVSADLDTPHQRNDICLESLYNLYAISCHSGIMGGGHYVTYAKNPNEKWYCYND 1524

  Fly  1102 SRVQEVSEDTALKAQAYLLFYER 1124
            |..:||..|......||:||||:
Zfish  1525 SSCKEVHSDEIDTDSAYILFYEQ 1547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp16-45NP_001284890.1 zf-UBP 108..159 CDD:280334
Peptidase_C19 307..>512 CDD:271592 59/212 (28%)
Peptidase_C19K <849..1123 CDD:239132 78/364 (21%)
usp32XP_686236.6 EF-hand_7 236..293 CDD:290234
EFh 237..293 CDD:238008
EF-hand_7 270..342 CDD:290234
EFh 270..338 CDD:298682
DUSP <519..586 CDD:283896
UBP12 521..1546 CDD:227847 202/995 (20%)
Ubiquitin_3 623..710 CDD:291502
Peptidase_C19 733..>918 CDD:271592 59/225 (26%)
Peptidase_C19 <1220..1546 CDD:271592 75/345 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5560
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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