DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp16-45 and usp16

DIOPT Version :9

Sequence 1:NP_001284890.1 Gene:Usp16-45 / 31458 FlyBaseID:FBgn0029763 Length:1126 Species:Drosophila melanogaster
Sequence 2:NP_001072158.1 Gene:usp16 / 447956 XenbaseID:XB-GENE-1007164 Length:864 Species:Xenopus tropicalis


Alignment Length:1145 Identity:309/1145 - (26%)
Similarity:462/1145 - (40%) Gaps:330/1145 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 RKGLGSPGQ-SDGATPTTASCQHIKKAVDAARLRRLLKSTGLLYECSQCQKLGKTAGSAAGAGAS 89
            ::|...|.| |..|.|.   |:|::||:|...:::.|.:..... |.:||...|...::......
 Frog     4 KRGKNLPAQDSLDAEPV---CKHLRKALDEGSVKKALVNVEWTV-CQECQADNKEKNNSDDELVE 64

  Fly    90 EGAVGPGGNPVTFEFDNTLWLCLKCGSQLCGR-ARHKHALEHYQTPHSDSHALAMNTRSFDIWCY 153
                           |.::|||||||.:.||| :..:|||.||.||.|:.|.|.::...:..|||
 Frog    65 ---------------DPSVWLCLKCGHRGCGRNSASQHALNHYNTPRSEPHCLVLSMDMWSAWCY 114

  Fly   154 ECDMKICSNLRKNLLECVELVKKLAQKPPTSTVTPSTPTISYIEEKLKAALEHLTPIVPMTGGSF 218
            .||.::..|....|.:.|:.:::.|:....||.:.:      ::|::||.:              
 Frog   115 LCDNEVPYNRSSRLGQLVDYLQRKAKAKSKSTDSAA------LDEEVKAEI-------------- 159

  Fly   219 DDSSSRGSLAAAGGGGGVGSSRNRQVAIPMPPPEPSSGLSTSDSLTSVPGMAKRIDQYSATTNGN 283
                                ....:|.|.....:|.             |.|| .|:.|:|.|.:
 Frog   160 --------------------VAENEVKIEDQEEKPK-------------GQAK-WDKASSTQNNS 190

  Fly   284 TGNKRLLTLETPRIENERLPRVRGLTNLGNTCFFNAVMQCLAQTPFLLSVLKELSEPGEEFILPG 348
            |.                 |.|:||:|||||||||||||.|:|||.:..:|.|.....:...:|.
 Frog   191 TE-----------------PTVKGLSNLGNTCFFNAVMQNLSQTPAVRELLNEAKTLKKPVTVPL 238

  Fly   349 GTFTIKDKGDIELPMIKG--TLSSWGGLTAALANALEELQAGGSVFTPRKLFDRLCVKCPQFTGG 411
            ...:.....::.|....|  ||:.|..||     .::|.:.|  |.||:::|.::|.|..:|.|.
 Frog   239 PDSSSPTNVEVHLEQQPGPLTLAMWQFLT-----EMQETKKG--VVTPKEVFSQVCKKAIRFKGY 296

  Fly   412 DQHDAHELLRQLLESVRNEDLKRYQRVILQNLGYKDQDVNSVSEEMRQKCKIYGNQAGDRILRP- 475
            .|.|:.||||.||:.:|.|:::|....:.::|      .|::.||  :..||..:....|.: | 
 Frog   297 QQQDSQELLRYLLDGMRGEEIQRVSLAMSKSL------QNTLDEE--EIKKIVKDSEKRRTI-PN 352

  Fly   476 --EQVFRGFLVSTLTCQDCHNVSSRHEYFLDMSLPV---AVEKPQPPQRRKPSPELSLTSSSSSV 535
              :.:|.|.|.||:.|::||.||..||.|||:||||   .:.|....:...|.||......:.  
 Frog   353 FVDHLFGGELTSTIMCEECHTVSLVHEPFLDLSLPVLDDVIVKKNSQKSSAPVPERKEEEEND-- 415

  Fly   536 TPSTGQPTINTKFTDGSVNFTASSPSFFLHAHEAASLGPSKSQVKKEKERQRKAKRAAKKR---Q 597
                          ||           ::...:.||.|.|       |..|:|||:||||:   |
 Frog   416 --------------DG-----------YIKERDEASPGAS-------KHLQKKAKKAAKKQAKNQ 448

  Fly   598 KSSLNLNGNDSGNGNELAESVDQDDASLASLGAGDGQAN----------DGLE---------QTN 643
            :....:.|......:...:...:|:..:|.... :.:||          |||.         :..
 Frog   449 RRQQKMQGKTVLLTDVAKQECSEDEEEIAPNNT-ESEANTRPDDEVPTADGLNTMKSDLSALENG 512

  Fly   644 GQTEDSTTSSVTTSEHSDADVEDNLVEDTAAPSTNNVPSSTASLTAPSKTYMDSNGNAQPPGEKR 708
            .:..:|....||    .|.|:      ||:..:|.:|..:...|..    .|::|.|......| 
 Frog   513 SEAIESAMERVT----EDTDI------DTSGHNTESVEMNAMELVG----NMENNNNNNTDVNK- 562

  Fly   709 DDTPEHMDKDSLEEDENDSGIATSPAPTATNSSTSTSATGNNN--------SVAGSGLSGSSGAL 765
                      :||..|...|          :|..:|:|..|.|        :.|.:||...|.|.
 Frog   563 ----------TLERTEGSGG----------DSMEATAAVDNGNADTVCVDDTEAANGLLDCSAAS 607

  Fly   766 EDPLAPASLVTAGLSEKGASVIRQVSVGAEQGASNGTEDADGEAKAIEQPEKTPSQAQAMAQAQA 830
            .|.....||....||                        :|.|...:| .|..|.|.|...|...
 Frog   608 MDNELTNSLNRLKLS------------------------SDIEPTQVE-IEILPDQQQPHTQIYE 647

  Fly   831 RTKRVRTQSYSDWSTTIAPRYQCEDGECSVQSCLNNFTAVELMTGQNKVGCDSCTQ----RINGS 891
            ........::|    |::.|........||.|||..||..|.:||.||:.|:.||:    |:|.|
 Frog   648 VINEDPKTAFS----TLSERKDLPLDGYSVLSCLYQFTHKETLTGNNKLLCNVCTRKQASRLNNS 708

  Fly   892 DP-KAKSVNTNATKQLLVSSPPAVLILHLKRFQLGPRCIFRKLTRPVSYPNLLDIAAFCGSKVKN 955
            :. :.|.|.|||.||:|||.|..:|.|||||||.....: ||:.|.:.:|.:||:|.||.||.||
 Frog   709 NKGEKKFVYTNAKKQMLVSDPSPILTLHLKRFQQNGFNL-RKINRHIKFPEVLDLAPFCTSKCKN 772

  Fly   956 LPNIDRKQKKLLYALYGVVEHSGGMYGGHYTAYVKVRPKVAPGDKRWKFLPHGSKAELDQDDDQL 1020
            :|   ..:.:|||:||||:||||.|..|||||:||:|   .|..:..:.:..|...|:       
 Frog   773 IP---AGESRLLYSLYGVIEHSGSMRSGHYTAFVKLR---RPNQQLCEMVLKGVIPEV------- 824

  Fly  1021 KKLEELLAKEKAREQHLKVLDDSDDFSNSSSNSSTSDESQTPATPLEEQQTQQAQQPQQPQQLEE 1085
                                                                ...:|.|      
 Frog   825 ----------------------------------------------------SGSEPGQ------ 831

  Fly  1086 AANVRAPPGKWYYVSDSRVQEVSEDTALKAQAYLLFYERI 1125
                    |.||::|||.||.||....|.:|||||||||:
 Frog   832 --------GSWYHISDSHVQAVSLSRVLSSQAYLLFYERM 863

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp16-45NP_001284890.1 zf-UBP 108..159 CDD:280334 25/51 (49%)
Peptidase_C19 307..>512 CDD:271592 77/212 (36%)
Peptidase_C19K <849..1123 CDD:239132 94/278 (34%)
usp16NP_001072158.1 zf-UBP 45..120 CDD:307999 30/89 (34%)
Peptidase_C19 <68..>316 CDD:321984 95/325 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 162..196 12/64 (19%)
Peptidase_C19K 197..>426 CDD:239132 83/271 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 397..497 24/134 (18%)
Peptidase_C19K <663..861 CDD:239132 94/277 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 284 1.000 Domainoid score I1603
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 364 1.000 Inparanoid score I2122
OMA 1 1.010 - - QHG47475
OrthoDB 1 1.010 - - D278083at2759
OrthoFinder 1 1.000 - - FOG0002415
OrthoInspector 1 1.000 - - otm48683
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2117
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.980

Return to query results.
Submit another query.