DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp16-45 and puf

DIOPT Version :10

Sequence 1:NP_572220.1 Gene:Usp16-45 / 31458 FlyBaseID:FBgn0029763 Length:1126 Species:Drosophila melanogaster
Sequence 2:NP_001262923.1 Gene:puf / 42935 FlyBaseID:FBgn0039214 Length:3930 Species:Drosophila melanogaster


Alignment Length:844 Identity:164/844 - (19%)
Similarity:257/844 - (30%) Gaps:276/844 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 EHYQTPHSDSHALAMNTRSFDIWCYECDMKICSNLRKNLLECVELVKKLAQKPPTSTVTPSTPTI 193
            |:|:..|.                |:.|         .|:..:.|:..|.:...|...||.  .:
  Fly  1894 EYYELRHG----------------YQDD---------GLVGLLNLMSNLIKYDTTFKYTPK--AL 1931

  Fly   194 SYIEEKLKAALEHLTPIVPMTGGSFDDSSSRGSLAAAGGGGGVGSSRNRQVAIPMPPP------- 251
            |:||:              :.|..||                            ||.|       
  Fly  1932 SFIEQ--------------LIGFLFD----------------------------MPSPADRQKPK 1954

  Fly   252 --EPSSGLSTSDSLTSV-PGMAKRIDQYSATTNGNTGNKRLLTLET------------PRIENER 301
              ..||..|..|.|..: .|.|         ||....:.|||....            ||.|...
  Fly  1955 CKSASSRASAYDLLVELCRGCA---------TNYAYLHGRLLAQHKSGPKQPYPWDYWPRDEGRA 2010

  Fly   302 LPRVRGLTNLGNTCFFNAVMQCLAQTPFLLSVLKELSEPGEEFILPGGTFTIKDKGDIELPMIKG 366
            .....||||||.||:..:.:|.|...|...:.:  |..|.......|.|.       :||..:..
  Fly  2011 ECGYVGLTNLGATCYMASCVQHLYMMPQARAAV--LRVPPNAARKHGPTL-------LELQRMFA 2066

  Fly   367 TLSSWGGLTAALANALEELQAGGSVFTPRKLFDRLCVKCPQFTGGDQHDAHELLRQLLESVRN-- 429
            .|                |::....:.||.......:.......|:|.|..|....|:..:.:  
  Fly  2067 YL----------------LESERKSYNPRSFCRVYQMDHQPLNTGEQKDMAEFFIDLVSKLEDMT 2115

  Fly   430 EDLKRYQRVILQNLGYKDQDVNSVSEEMRQKCKIYGNQAGDRILRPEQVFRGFLVSTLTCQDCHN 494
            .|||...:                                       ::|.|.|.:.:...||.:
  Fly  2116 PDLKHLVK---------------------------------------RLFCGSLSNNVVSLDCGH 2141

  Fly   495 VSSRHEYFLDMSLPVAVEKPQPPQRRKPSPELSLTSSSSSVTPSTGQ-------------PTI-- 544
            ||...|.|..:...||..:.......:.:.:.:|...:.......|:             |.|  
  Fly  2142 VSRTAEDFYTVRCQVADMRNLQESLDEVTVKDTLEGDNMYTCSQCGKKVRAEKRACFKKLPQILC 2206

  Fly   545 -NT-KFT-------DGSVNFTASSPSFFLHAHEA-ASLGPSKSQVKKEKERQRKAKRAAKKRQKS 599
             || ::|       ...||...|.|......|.. .:|.|  .|.|:|:||::|.|..|      
  Fly  2207 FNTMRYTFNMVTMLKEKVNTHFSFPLRLNMCHYVEKTLMP--QQYKEERERRQKEKEGA------ 2263

  Fly   600 SLNLNGNDSGNGNELAESVDQDDA------SLASLGAGDGQANDGLEQTNGQTEDSTTSSVTTSE 658
                :|:..||.||.||:...||.      .|..:....|.|:.|  ......::.|.:|..|.|
  Fly  2264 ----DGSGDGNDNEKAEATLDDDIEECYEYELVGVTVHTGTADGG--HYYSFIKERTKTSYHTHE 2322

  Fly   659 H----SDADVEDNLVEDTAAPSTNNVPSSTASLTAPSKTYMD-----SNGNAQPPGEKRDDTPEH 714
            .    :||:|:.......||.......:| .:..:.::.|:|     :|.......|:|  .|||
  Fly  2323 RWFLFNDAEVKPFDPSQIAAECFGGEMTS-KTYDSVTEKYLDFSFEKTNSAYMLFYERR--LPEH 2384

  Fly   715 MDKDSLEEDENDSGIATSPAPTATNSSTSTSATGNNNSVAGSGLSGSSGALEDPLAPASLVTAGL 779
                 |:...::..:..:|:||....|.:..                         |..:.|:. 
  Fly  2385 -----LQRRHSELLVTPTPSPTVEEKSEAEE-------------------------PTKMETSS- 2418

  Fly   780 SEKGASVIRQVSVGAEQGASNGTEDADGEAKAIEQPEKTPSQAQAMAQAQARTKRVRTQSYSDWS 844
            ||..|.|  .|.|..|:.........|.|:|  |.|.|.........|.:...|::..||     
  Fly  2419 SEIKADV--DVEVEVEEKDKEKPAQTDTESK--ETPAKEEIADDKSKQDEPEEKKIEKQS----- 2474

  Fly   845 TTIAPRYQCEDGECSVQSCLNNFTAVELMTGQNK---VGCDSCTQRINGSDPKAKSVNTNATKQ 905
                     .:||...::.........:.|.:.|   ..||: .|:.|.|:.||.:....:|.:
  Fly  2475 ---------REGEEKSETDEKPTEMTTVSTEEEKQPTANCDN-HQQNNNSNSKASNDQQPSTSK 2528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp16-45NP_572220.1 zf-UBP 108..159 CDD:460464 5/29 (17%)
UBP12 <307..990 CDD:227847 129/644 (20%)
Peptidase_C19 307..>512 CDD:470612 40/206 (19%)
Peptidase_C19K <849..1123 CDD:239132 12/60 (20%)
pufNP_001262923.1 peptidase_C19C 2013..2382 CDD:239124 90/449 (20%)
DUF3517 2648..>2884 CDD:463438
MDN1 <3661..>3887 CDD:444083
Blue background indicates that the domain is not in the aligned region.

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