DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp16-45 and Usp12-46

DIOPT Version :10

Sequence 1:NP_572220.1 Gene:Usp16-45 / 31458 FlyBaseID:FBgn0029763 Length:1126 Species:Drosophila melanogaster
Sequence 2:NP_651099.1 Gene:Usp12-46 / 42702 FlyBaseID:FBgn0039025 Length:424 Species:Drosophila melanogaster


Alignment Length:411 Identity:96/411 - (23%)
Similarity:138/411 - (33%) Gaps:144/411 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   668 LVEDTAAPSTNNVPSST----------ASLTAPSKTYMDSNGNAQPPGEKRDDTPEHMDKDSLEE 722
            |.|..|.||..| |.:|          :|:.:.|.:..:||.|:                   ..
  Fly   127 LAERNAGPSNGN-PKATNQGGSTSAMASSIASKSSSTSNSNSNS-------------------NS 171

  Fly   723 DENDSGIATSPAPTATNSSTSTSATGNNNSVAGSGLSGSSGALEDPLAPASLVTAGLSEKGASVI 787
            ..|.:|          |||.||.:...|.||..:  |||..|...|:.                 
  Fly   172 TTNSNG----------NSSNSTGSLNANTSVLDA--SGSLTATTTPII----------------- 207

  Fly   788 RQVSVGAEQGASNGTEDADGEAKAIEQPEKTPSQAQAMAQAQAR-----TKRVRTQSYSDWSTTI 847
                    .|...||..|:.|      |.......|.:..::.|     |...:.:::.|....:
  Fly   208 --------SGNGTGTNGANSE------PTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQVDV 258

  Fly   848 APRYQCEDGECSVQSCLNNFTAVELMTGQNKVGCDSCTQRINGSDPKAKSVNTNATKQLLVSSPP 912
                   |...|:..||..|:..|.:...||..||:|..            ...|.|::.|...|
  Fly   259 -------DQNTSITHCLRCFSNTETLCSDNKFKCDNCCS------------YQEAQKRMRVKKLP 304

  Fly   913 AVLILHLKRFQLGPRCIFR---KLTRPVSYPNLLDIAAFCGSKVKNLPNIDRKQKKLLYALYGVV 974
            .:|.||||||:...:  |.   |::..|.:|  |::..|..|  .:..|.||     ||.|..||
  Fly   305 MILALHLKRFKYMEQ--FNRHIKVSHRVVFP--LELRLFNTS--DDAVNPDR-----LYDLTAVV 358

  Fly   975 EHSG-GMYGGHYTAYVKVRPKVAPGDKRWKFLPHGSKAELDQDDDQLKKLEELLAKEKAREQHLK 1038
            .|.| |...|||.:.||               .||  ..|..|||.:.|:|              
  Fly   359 IHCGSGPNRGHYISIVK---------------SHG--LWLLFDDDMVDKIE-------------- 392

  Fly  1039 VLDDSDDFSNSSSNSSTSDES 1059
             ....:||...:|:...|.|:
  Fly   393 -ASTIEDFYGLTSDIHKSSET 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp16-45NP_572220.1 zf-UBP 108..159 CDD:460464
UBP12 <307..990 CDD:227847 81/340 (24%)
Peptidase_C19 307..>512 CDD:470612
Peptidase_C19K <849..1123 CDD:239132 58/215 (27%)
Usp12-46NP_651099.1 Peptidase_C19G 25..419 CDD:239128 96/411 (23%)
Blue background indicates that the domain is not in the aligned region.

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