Protein Alignment Usp16-45 and not

DIOPT Version :10

• Sequence 1: NP_572220.1
• Gene: Usp16-45 / 31458
• FlyBaseID: FBgn0029763
• Length: 1126
• Species: Drosophila melanogaster
• Sequence 2: NP_001401041.1
• Gene: not / 40030
• FlyBaseID: FBgn0013717
• Length: 703
• Species: Drosophila melanogaster
• Alignment Length: 622
• Identity: 123/622 - (19%)
• Similarity: 189/622 - (30%)
• Gaps: 233/622 - (37%)

  Fly     4 KRQADSRDH----DC------------STDSGNEDLHHRKGLGSPGQSDGATPTTASCQHIK--- 49
            |...|:..|    ||            |.|:|::   ......:...:..|..:...|:|.:
  Fly   159 KNPLDATKHLRLSDCLRTVQKLAIELESADAGSD---ASAQANASADASSAVMSETGCRHYQSYV 220

  Fly    50 --------KAVDA---------ARLRRLLKSTGLLYECSQCQKLGKTAGSAAGAGASEGAVGPGG 97
                    :.:||         ||.|:.:..     .|.:|...|
  Fly   221 KEHSYDTFRVIDAYFAACVNRDARERKAIHC-----NCFECGSYG-------------------- 260

  Fly    98 NPVTFEFDNTLWLCLKCGSQLCGRARHKHALEHYQTPHSDSHALAMNTRSFDIWCYEC-DMKICS 161
                    ..|:.||.|....|   |..|...|.:   |..|.:|:......::||.| |....:
  Fly   261 --------IQLYACLHCIYFGC---RGAHITSHLR---SKKHNVALELSHGTLYCYACRDFIYDA 311

  Fly   162 NLRKNLLECVELVKKLAQKPPTSTVTPSTPTISYIEEKLKAALEHLTPIVPMTGGSFDDSSSRGS 226
            ..|:..|...:|..|..||           :|.::            |.||.|        ...:
  Fly   312 RSREYALINRKLEAKDLQK-----------SIGWV------------PWVPTT--------KETN 345

  Fly   227 LAAAGGGGGVGSSRNRQVAIPMPPPEPSSGLSTSDSLTSVPGMAKRIDQYSATTNGNTGNKRLLT 291
            |..|       ::|.|.|.     |..:.||
  Fly   346 LLLA-------NARRRLVR-----PNQTIGL---------------------------------- 364

  Fly   292 LETPRIENERLPRVRGLTNLGNTCFFNAVMQCLAQTPFLLSVLKELSEPGEEFILPGGTFTIKDK 356
                          |||.|||.|||.|.::|.|..||.|                  ..:.:.|:
  Fly   365 --------------RGLLNLGATCFMNCIVQALVHTPLL------------------SDYFMSDR 397

  Fly   357 GDIELPMIKGTLSSWGGLTAALANALEELQAGG-SVFTPRKLFDRLCVKCPQFTGGDQHDAHELL 420
            .|.      |:.||...|...::...:|..:|. |..:..:|...:........|.:|.||||..
  Fly   398 HDC------GSKSSHKCLVCEVSRLFQEFYSGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFF 456

  Fly   421 RQLLESVRNEDLK-RYQRVILQNLGYKDQDVNSVSEEMRQKCKIYGNQAGDRILRPEQVFRGFLV 484
            ...|:.:....:| :.:.....|........|| |......|  || |....|   :|:|.|.|.
  Fly   457 IATLDVLHRHCVKAKAEHESKSNSSGSGSGTNS-SNSSSSHC--YG-QCNCII---DQIFTGMLQ 514

  Fly   485 STLTCQDCHNVSSRHEYFLDMSLPVAVEKPQPPQRRKPSPELSLTSSSSSVTPSTGQPTINTKFT 549
            |.:.||.|:.||:.::.|.|:||                 :|..|::...|||.|        ..
  Fly   515 SDVVCQACNGVSTTYDPFWDISL-----------------DLGETTTHGGVTPKT--------LI 554

  Fly   550 DGSVNFTASSPSFFLHAHEAASLGPSKSQVKKEKERQ 586
            |....:|.:.     |...||.:..|..:..:|..:|
  Fly   555 DCLERYTRAE-----HLGSAAKIKCSTCKSYQESTKQ 586

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp16-45	NP_572220.1	zf-UBP	108..159	CDD:460464	15/51 (29%)
		UBP12	<307..990	CDD:227847	69/282 (24%)
		Peptidase_C19	307..>512	CDD:470612	55/206 (27%)
		Peptidase_C19K	<849..1123	CDD:239132
not	NP_001401041.1	zf-UBP	253..310	CDD:460464	18/90 (20%)
		Peptidase_C19D	365..696	CDD:239125	70/283 (25%)