DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp16-45 and scny

DIOPT Version :9

Sequence 1:NP_001284890.1 Gene:Usp16-45 / 31458 FlyBaseID:FBgn0029763 Length:1126 Species:Drosophila melanogaster
Sequence 2:NP_729092.1 Gene:scny / 38648 FlyBaseID:FBgn0260936 Length:1038 Species:Drosophila melanogaster


Alignment Length:1073 Identity:210/1073 - (19%)
Similarity:341/1073 - (31%) Gaps:377/1073 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 EKLKAALEHLTPIVPMTGGSFDDSSSRGSLAAAGGGGGVGSSRNRQVAIPMPPPEPSSGLSTSDS 262
            |.||:....:.|..|.....|...::.|.|..|.|....|:.:..:        .|::       
  Fly    75 ENLKSKYIVIKPGNPGAINGFSGKNNTGKLVGANGHDNNGARKQAE--------HPNN------- 124

  Fly   263 LTSVPGMAKRIDQYS---ATTNGN--TGNKRLL-TLETPRI---ENERLPRV-RGLTNLGNTCFF 317
                  .:..|:.::   .|:|.|  ...||:| ..|..||   ::||..:| .|:.|:||||:.
  Fly   125 ------QSHHINHHNHQHPTSNPNELPKPKRVLYPRENIRIGWKQSERKWQVGTGMINVGNTCYL 183

  Fly   318 NAVMQCLAQTPFLLSVLK---------ELSEPGEEFILPGGTFTIKDKGDIELPMIKGTLSSWGG 373
            |:.:|.|...|.|.:.|.         .::|||.                             |.
  Fly   184 NSTLQALLHIPALANWLVSEQAHLADCNVAEPGS-----------------------------GC 219

  Fly   374 LTAALANALEELQAGGSVFTPRKLFDRLCVKCPQFTGGDQHDAHELLRQLLESVRNEDLKRYQRV 438
            :..|:...|...|:..|...|..::.:|...|.....|.|.||||.||.|:|::....|.|::  
  Fly   220 IICAMTKTLLATQSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFR-- 282

  Fly   439 ILQNLGYKDQDVNSVSEEMRQKCKIYGNQAGDRILRPEQVFRGFLVSTLTCQDCHNVSSRHEYFL 503
                 .||:.|      ::.::....|           |:|.|:|.|.:.|..|::||...::|.
  Fly   283 -----NYKELD------QLVKETTPLG-----------QIFGGYLRSEVRCLSCNHVSITFQHFQ 325

  Fly   504 DMSL----------------------------------------------PVAV----------- 511
            |:.|                                              |:.:           
  Fly   326 DLLLDIRKADSLEDAFEGHFSRERLEDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIG 390

  Fly   512 ------------------------EKPQPPQRRKPSPELSLTSS--------------------- 531
                                    .:.||...|..|....|.:|                     
  Fly   391 NKLTKQISFKSRIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFD 455

  Fly   532 --------------------------SSSVTPSTGQPTINTKFTDGSVN-----FTASSPSFFLH 565
                                      |.:.:|:..:|. ..:.|:|...     .|.||||    
  Fly   456 DSYVRPIAMHSVCNTNAYIMFFELDLSQAASPAANRPN-GVRLTNGHSTTPVPAATVSSPS---- 515

  Fly   566 AHEAASLGPSKSQVKKEKERQRKAKRAAKKRQKSSLNLNGNDSGNGNELAESVDQDDASLASLGA 630
              ....:||..............|::.|.:.::.    |.....||.:|.....||.|....:||
  Fly   516 --PTRFIGPQLPAGGANGYTNGNAQKTAIQFKQQ----NQQSPQNGLQLGTGKFQDTAKPPLVGA 574

  Fly   631 -GDGQANDGLEQTNGQTEDSTTSSVTTSEH-------------SDADVEDNLVEDTAAPSTNNVP 681
             ..|:|... ...|| .:.|:.||.::|.|             .|.|:||   |....|:|..:|
  Fly   575 HAKGEATSA-PTANG-NKSSSPSSNSSSNHKSINQQQYLPISSDDEDIED---EMKPRPTTAQLP 634

  Fly   682 SSTASLTAPSKTYMDSNGNAQPPGEKRDDTPEHMDKDSLEEDENDSGIATSP------APTATNS 740
            |      .|:.|...:...|:.|.:.:..||......||...|:.|....:|      .|:..:|
  Fly   635 S------MPNMTENHTEPKAKSPVKIQVKTPVKTPLKSLVPYESASEEEEAPLPNPRKRPSGEDS 693

  Fly   741 STSTSATGNNN---SVAGSGLSGSSGALEDPLAPASLVTAGLSEKGASVIRQVSVGAEQGASNGT 802
            |.|...:|..|   ...||..:||:         :|.|....|::....|.::....::.| :..
  Fly   694 SESDQESGQTNGHSKTNGSHTNGSA---------SSSVHVNNSKQKTDAIDEIFKSLKKSA-DSD 748

  Fly   803 EDADGEAKAIE-----QPEKTPSQAQAMAQAQARTKRVRTQSYSDWSTTIAPRYQCEDGECSVQS 862
            ||.|.|..:|:     .|:|   |:|:.::|....|           |..:|            :
  Fly   749 EDDDEEEPSIQLTNGWHPQK---QSQSQSKAPPSPK-----------TPPSP------------A 787

  Fly   863 CLNNFTAVELMTGQNKVGC---DSCTQRINGSDPKAKSVNTNATKQLLVSSP----PAVLILHLK 920
            .:.:.|.:..:|..::|..   |.....:.||..|..:.|.|.......|.|    ||.  ...|
  Fly   788 VIKSKTGIWKVTRNDEVDAIEDDVDVVVVEGSPVKIPTPNKNHRNPFSSSKPSTDSPAT--PGAK 850

  Fly   921 RFQLGPRCIFRKLTRPVSYPNLLDIAAFCGSKVKNLPNIDRKQKKLLYALYGVVEHSGGMYGGHY 985
            |.:|......:...:|.........|...||.:..|       .|..|..||             
  Fly   851 RQKLLNGSALKSHQQPRVGNGYQSNATSNGSTINEL-------LKQSYRGYG------------- 895

  Fly   986 TAYVKVRPKVAPGDKRWKFLPHGSKAELDQDDDQLKKLEELLAKEKAREQHLKVLDDSDDFS--- 1047
                  .|.::     |    :|..|||:         :|||.  .||||..:.:||.::..   
  Fly   896 ------SPVLS-----W----NGKPAELE---------KELLV--DAREQRQRDIDDDEENEMDR 934

  Fly  1048 ------NSSSNSSTSDESQTPA-TPLEEQQTQQ 1073
                  .|.|....:..:.||. .|.:|.:.|:
  Fly   935 GRQRKVKSGSAKGNNASNSTPGYNPFQEYEGQK 967

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp16-45NP_001284890.1 zf-UBP 108..159 CDD:280334
Peptidase_C19 307..>512 CDD:271592 52/294 (18%)
Peptidase_C19K <849..1123 CDD:239132 48/242 (20%)
scnyNP_729092.1 Peptidase_C19E 171..477 CDD:239126 58/358 (16%)
UCH 172..477 CDD:278850 58/357 (16%)
Asp-B-Hydro_N <617..>731 CDD:191249 33/131 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456888
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24006
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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