DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp16-45 and Usp15-31

DIOPT Version :9

Sequence 1:NP_001284890.1 Gene:Usp16-45 / 31458 FlyBaseID:FBgn0029763 Length:1126 Species:Drosophila melanogaster
Sequence 2:NP_611959.2 Gene:Usp15-31 / 37954 FlyBaseID:FBgn0050421 Length:1272 Species:Drosophila melanogaster


Alignment Length:1226 Identity:250/1226 - (20%)
Similarity:408/1226 - (33%) Gaps:432/1226 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ATPTTASCQHIKKAVDAARLRRLLKSTGLLYECSQCQKLGKTAGSAAGA------GASEGAVGPG 96
            ||.||.:.........|.::||........:..::..|......|:|||      |.:.||....
  Fly    42 ATKTTTTAADTSTTNAAKKIRRTFSMPRNPFRWTRKFKTAVAVTSSAGAENDNESGKNNGARERR 106

  Fly    97 GNPVTFEFDNTLWLCLKCGSQLCGRARHKHALEHYQTP-------------------HSDSHALA 142
            |:      ...:..|:..|.   ||:....:|..|:.|                   .|.|:..:
  Fly   107 GS------HTAISSCVGGGR---GRSGSIVSLSSYEAPFISSTNNNTTTASNGNNNNSSSSNINS 162

  Fly   143 MNTRSFDIWCYECDMKICSNLRKNLLECVELVKKLAQKPPTSTVTPSTPTISYIEEKLKAALEHL 207
            ..||:.....:.   |..:.:.::|...|.:|.:....|..        .|::||          
  Fly   163 KRTRALRRSSFR---KFLNRIAQHLSSTVNVVSEEKHSPAN--------RIAFIE---------- 206

  Fly   208 TPIVPMTGGSF--DDSSSRG----SLAAAGGGGGVGSSRNRQVAIPMPPPEPSSGLSTSDSLTSV 266
              |||...|.:  .:::..|    |.:::|||||.|.                            
  Fly   207 --IVPFYTGCWRRKEANKHGQPSVSGSSSGGGGGAGG---------------------------- 241

  Fly   267 PGMAKRID-----QYSATTNGNTGNKRLLTLETPRIENERLPRVRGLTNLGNTCFFNAVMQCLAQ 326
            ||..:|:.     |:.|                     ::.|.|.||.|.|||||.|||:|||:.
  Fly   242 PGGGERVPPIGGYQWPA---------------------DQTPGVMGLKNHGNTCFMNAVLQCLSH 285

  Fly   327 TPFLLSVLKELSEPGEEFILPGGTFTIKDKGDIELPMIKGTLSSWGGLTAALANALEEL-----Q 386
            |..|          .|.|:|......:|.:..|.    .....:.|.||..|||.|:.|     :
  Fly   286 TDIL----------AEYFVLDQYKADLKRRNKIN----SRKFGTKGELTEQLANVLKALWTCKNE 336

  Fly   387 AGGSVFTPRKLFDRLCVKCPQFTGGDQHDAHELLRQLLESVRNEDL----KRYQRVILQNLGYKD 447
            :..|. :.:.:.||...   ||....||||.|.|..||:.| :|||    ||..:.:..:.|..|
  Fly   337 SDHST-SFKAVVDRYGT---QFRSSTQHDAQEFLFWLLDKV-HEDLNTASKRRYKSLKNSYGRSD 396

  Fly   448 QDVNSVSEEMRQKCKIYGNQAGDRILRPEQVFRGFLVSTLTCQDCHNVSSRHEYFLDMSLPVAVE 512
            :.:.:.:.....:|.....||         ||:....|:|||..|...|:..:.|..:|    |:
  Fly   397 EVIAAETLANHIRCNNSFVQA---------VFQAQFRSSLTCPRCEKQSNTFDPFHCIS----VQ 448

  Fly   513 KPQPPQRRKPSPELSLTSSSSSVTPSTGQPTINTKFTDGSVNFTASSPSFFLHAHEAASLG---P 574
            .||            ||..:..||                |.:....|       ....:|   |
  Fly   449 LPQ------------LTQQTIFVT----------------VVYMTRLP-------RQVRMGLRVP 478

  Fly   575 SKSQVKKEKERQRKAKRAAKKRQKSSLNLNGNDSG-NGNELAESVDQDDASLASLGAGDGQANDG 638
            :.|.:...:|:.:.                  |:| .|:.:.         |..|.|      :|
  Fly   479 AGSPIVALREQLQA------------------DTGIEGSRMV---------LVDLNA------EG 510

  Fly   639 LEQTNGQTED-STTSSVTTSEHSDADVEDNLVEDTAAPSTNNVPSST--ASLTAPSKTYMDSNGN 700
            ..:....|:. .|.||:.|.         ..:|         ||::|  |....||:|       
  Fly   511 FTRVFYDTQPVETLSSIETI---------YCIE---------VPAATPVAKAATPSET------- 550

  Fly   701 AQPPGEKRDDTPEHMDKDSLEEDENDSGIATSPAPTATNSSTSTSATGNNNSVAGSGLS----GS 761
                |:|...|                  |.:|:|.|..|.........|...|..|..    |:
  Fly   551 ----GDKSAPT------------------AVTPSPAAAQSQADLLLLVANVYRAKDGADITRFGA 593

  Fly   762 SGALEDP---------------LAPASLVTAGLSEKGASVIRQVSVGAEQGASNGTEDADGEAKA 811
            ..:::.|               :||  |:...:......:.....:..:..::    |.|...:.
  Fly   594 PFSMKAPRDCSYQDLQKRMLREMAP--LLKPEVFSYATPLAEMFRIRLQDPSA----DPDTYLEQ 652

  Fly   812 IEQPEKTPSQAQAMAQAQARTKRVRTQSYSDWSTT----IAPRYQCED----------------- 855
            :|.|..|.....|::...:.......:...:||:.    |:.:...|:                 
  Fly   653 VEHPLLTEMIDMALSVLSSEAGPQHIKLLLEWSSPEAHFISKQQDTEEAVVEHESVARLSASKPS 717

  Fly   856 --GECSVQSCLNNFTAVELMTGQNKVGCDSCTQRINGSDPKAKSVNTNATKQLLVSSPPAVLILH 918
              ...:::.||.::|..|.::.::...|..|.|.:    |..|::.        :.|.|.:|::|
  Fly   718 DTAALTLEQCLEHYTKAETLSAEDAWRCPHCQQYL----PVVKTLG--------LWSLPDILVVH 770

  Fly   919 LKRFQ----LGPRCIFRKLTRPVSYPNLLDIAAF-----------------------------CG 950
            .|||:    .||:.  .|||..|.:|    :.||                             .|
  Fly   771 FKRFRQHQSKGPQA--AKLTTMVKFP----LTAFDMSPHLARGVHESASSSLGMGTGIGLGLGLG 829

  Fly   951 SKV-KNLPNIDRKQ---------KKLLYALYGVVEHSGG-MYGGHYTAYVKVRPKVAPGDKRW-K 1003
            |.. |...::|.:.         |...|.||.|..|.|. :..|||||..|     .|.|::| |
  Fly   830 SNPWKKARSVDSRSSTLNSRCDAKDTRYDLYAVCYHQGDTLETGHYTAACK-----NPYDRQWYK 889

  Fly  1004 FLPHGSKAELDQDDDQLKKL------EELLAKEKAREQHLKVLDDSDDFSNSSSNSSTSDESQ-T 1061
            |           ||.::.|:      ::::..|.....:.:...|:.:.|.|||||.....|: .
  Fly   890 F-----------DDQRVSKVPEDDIEQDIINNEAYMLFYQRRSVDAGECSGSSSNSGDHWVSRIA 943

  Fly  1062 PATPLEEQQTQQAQQPQQPQQLEEAANVRAPPGKWYYVSDSRVQEVSEDTALKAQA 1117
            ||:......|  :.:.::|.:|||  |..:|          ...||:|    |||:
  Fly   944 PASSSSASST--SGKEREPVKLEE--NTESP----------AAVEVTE----KAQS 981

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp16-45NP_001284890.1 zf-UBP 108..159 CDD:280334 11/69 (16%)
Peptidase_C19 307..>512 CDD:271592 63/213 (30%)
Peptidase_C19K <849..1123 CDD:239132 75/340 (22%)
Usp15-31NP_611959.2 Peptidase_C19 <262..>383 CDD:271592 48/139 (35%)
Peptidase_C19 266..>461 CDD:271592 70/254 (28%)
Peptidase_C19R <713..918 CDD:239139 51/238 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456897
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5560
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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