Protein Alignment Usp16-45 and Usp3

DIOPT Version :10

• Sequence 1: NP_572220.1
• Gene: Usp16-45 / 31458
• FlyBaseID: FBgn0029763
• Length: 1126
• Species: Drosophila melanogaster
• Sequence 2: NP_001020595.2
• Gene: Usp3 / 363084
• RGDID: 1308852
• Length: 520
• Species: Rattus norvegicus
• Alignment Length: 483
• Identity: 110/483 - (22%)
• Similarity: 173/483 - (35%)
• Gaps: 157/483 - (32%)

  Fly    88 ASEGAVGPGGNPVTF-----EFDNTLWLCLKCGSQLCGRARHKHALEHY---QTP---HSDS--- 138
            |.:.|..|.|:|.::     ..:.:.|:||.|.|..|||..:.||.:||   |.|   |..|
  Rat    13 APDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQIPLLNHKRSEKQ 77

  Fly   139 ----HALAMNTRSFDIWCYECDMKICSNLRKNLLECVELVKKLAQKPPTSTVTPSTPTISYIEEK 199
                |.:.|:..|:..:||.||..:.::.:..|::.|.
  Rat    78 EKAQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVR--------------------------- 115

  Fly   200 LKAALEHLTPIVPMTGGSFDDSSSRGSLAAAGGGGGVGSSRNRQVAIPMPPPEPSSGLSTSDSLT 264
                 |||.        :.::|:             ..:.|:|:..:       ....|.:..|.
  Rat   116 -----EHLQ--------NLENSA-------------FTADRHRKRKL-------LENSSLNSKLL 147

  Fly   265 SVPGMAKRIDQYSATTNGNTGNKRLLTLETPRIENERLPRVRGLTNLGNTCFFNAVMQCLAQTPF 329
            .|.|....|   .||                           ||.|||||||.||::|.|:....
  Rat   148 KVNGSTAAI---CAT---------------------------GLRNLGNTCFMNAILQSLSNIEQ 182

  Fly   330 LLSVLKELSEPGEEFILPGG------TFTIKDKGDIELPMI----KGTLSSWGGLTAALANALEE 384
            .....|||  |..|  |..|      |:..:.:||..:.::    |...:.|.|...|
  Rat   183 FCCYFKEL--PAVE--LRNGKTAGRRTYHTRSQGDSNVSLVEEFRKTLCALWQGSQTA------- 236

  Fly   385 LQAGGSVFTPRKLFDRLCVKCPQFTGGDQHDAHELLRQLLESVRNEDLKRYQRVILQNLGYKDQD 449
                   |:|..||..:....|.|.|..|.||||.:|.||:.:..|         ||. |:....
  Rat   237 -------FSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE---------LQG-GFNGVS 284

  Fly   450 VNSVSEE-----MRQKCKIYGNQAGDRILRPEQVFRGFLVSTLTCQDCHNVSSRHEYFLDMSLPV 509
            .:::.:|     ...||.|.|   ...::  ..:|.|.|.:.:.|..|...|.:.:.|||:||.:
  Rat   285 RSAILQENSTLSANNKCCING---ASTVV--TTIFGGILQNEVNCLICGTESRKFDPFLDLSLDI 344

  Fly   510 AVE-KPQPPQRRKPSPELSLTSSSSSVT 536
            ..: :.:..:.::..|..||.....|.|
  Rat   345 PSQFRSKRSKNQENGPVCSLRDCLRSFT 372

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp16-45	NP_572220.1	zf-UBP	108..159	CDD:460464	23/63 (37%)
		UBP12	<307..990	CDD:227847	67/246 (27%)
		Peptidase_C19	307..>512	CDD:470612	62/219 (28%)
		Peptidase_C19K	<849..1123	CDD:239132
Usp3	NP_001020595.2	zf-UBP	29..105	CDD:460464	23/75 (31%)
		UCH	159..508	CDD:425685	68/274 (25%)