DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp16-45 and Usp32

DIOPT Version :10

Sequence 1:NP_572220.1 Gene:Usp16-45 / 31458 FlyBaseID:FBgn0029763 Length:1126 Species:Drosophila melanogaster
Sequence 2:XP_011247292.1 Gene:Usp32 / 237898 MGIID:2144475 Length:1618 Species:Mus musculus


Alignment Length:1008 Identity:209/1008 - (20%)
Similarity:328/1008 - (32%) Gaps:341/1008 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   296 RIENERLPRVR---GLTNLGNTCFFNAVMQCLAQTPFLLSVLKELSEPGEEFILPG-GTFTIKDK 356
            :|:..::|..:   ||:|||||||.|:.:||::.|           :|..::.:.| ..:.:...
Mouse   735 KIDRHKVPTEKGATGLSNLGNTCFMNSSIQCVSNT-----------QPLTQYFISGRHLYELNRT 788

  Fly   357 GDIELPMIKGTLSSWGGLTAALANALEELQAGGSV-FTPRKLFDRLCVKCPQFTGGDQHDAHELL 420
            ..|.:   ||.::...|      :.::||.:|... ..|.||...:....|:|.|..|.|:.|||
Mouse   789 NPIGM---KGHMAKCYG------DLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 844

  Fly   421 RQLLESVRNEDLKRYQRVILQNLGYKDQDVNSVSEEMRQKCKIYGNQAGDRILRPEQ-----VFR 480
            ..||:.: :|||.|........|  ||.|.....|        ...:|.|..||..:     :|.
Mouse   845 AFLLDGL-HEDLNRVHEKPYVEL--KDSDGRPDWE--------VAAEAWDNHLRRNRSIVVDLFH 898

  Fly   481 GFLVSTLTCQDCHNVSSRHEYFLDMSLPVAVEKPQPPQRRKPSPELSLT-SSSSSVTPSTGQPTI 544
            |.|.|.:.|:.|.::|.|.:.|..:|||:.::...         .|.:| ......||......:
Mouse   899 GQLRSQVKCKTCGHISVRFDPFNFLSLPLPMDSYM---------HLEITVIKLDGTTPIRYGLRL 954

  Fly   545 N--TKFTDGSVNFTASSPSFFLHAHEAASLGPSKSQVKKEKERQRKAKRAAKKRQKSSLNLNGND 607
            |  .|:|.             |....:...|....|:...:......|...:..||..|:::|  
Mouse   955 NMDEKYTG-------------LKKQLSDLCGLKSEQILFAEVHSSNIKNFPQDNQKVRLSVSG-- 1004

  Fly   608 SGNGNELAESVDQDDASLASLGAGDGQANDGLEQTNGQTEDSTTSSVTTSEHSDADVEDNLVEDT 672
                               .|.|        .|.....:..|..|.:.|             :.:
Mouse  1005 -------------------FLCA--------FEIPIPASPVSACSPIQT-------------DCS 1029

  Fly   673 AAPSTNNVPSSTASLTAPSKTYMDSNG---NAQPPGEKRDDT----PEHMDKDSLEEDENDSGIA 730
            ::||||.:.:.|.:...|...:: .||   ...|.|.:::.|    ..||  ..|.:|.....|.
Mouse  1030 SSPSTNGLFTLTTNGDLPRPIFI-PNGMPNTVVPCGTEKNVTNGIVNGHM--PPLPDDPFTGYII 1091

  Fly   731 TSPAPTATNSSTSTSATGNNNSVAGSGLSGSSGALEDPLAPASLVTAGLSEKGA---SVIRQVSV 792
            ..............|:..|..|:.|..|          :.|.::.|.......|   .|.|..|.
Mouse  1092 AVHRKMMRTELYFLSSQKNRPSLFGMPL----------IVPCTVHTRKKDLYDAVWIQVSRLASP 1146

  Fly   793 GAEQGASNGTEDADGEAKAIEQPEKTPSQAQAMAQAQARTKRVRTQSYS---------------- 841
            ...|.|||..:|.|                .:|......|.||..:..:                
Mouse  1147 LPPQEASNHAQDCD----------------DSMGYQYPFTLRVVQKDGNSCAWCPWYRFCRGCKI 1195

  Fly   842 ----------------DWS-TTIAPRYQ------CEDGE------------CSVQSCLNNFTAVE 871
                            ||. |.:..|||      .|:.|            .::.|||..||:.|
Mouse  1196 DCGEDRAFIGNACIAVDWDPTALHLRYQTSQERVVEEHESVEQSRRAQAEPINLDSCLRAFTSEE 1260

  Fly   872 LMTGQNKV-GCDSCTQRINGSDPKAKSVNTNATKQLLVSSPPAVLILHLKRFQ-LGPRCIFRKLT 934
            .: |:|:: .|..|            ..:..|||:|.:...|.:||:|||||| :..|.|  |..
Mouse  1261 EL-GENEMYYCSKC------------KTHCLATKKLDLWRLPPILIIHLKRFQFVNGRWI--KSQ 1310

  Fly   935 RPVSYP-NLLDIAAF--------CGSK----------VKNLPNIDRKQKKLLYALYGVVEHSGG- 979
            :.|.:| ...|.:||        |..|          ...:|..|.|:..        ::.|.| 
Mouse  1311 KIVKFPRESFDPSAFLVPRDPTLCQHKPLTPQGDDFSELRIPAGDVKKVD--------IQSSAGE 1367

  Fly   980 ------MYGGHYTAYVKVRPKVAPGDKR---------WKFLPHGSKAELDQDDDQLKKLEELLAK 1029
                  ......:|.|...||.:|...|         ....|:.|...|.::..:| :|.::.:|
Mouse  1368 EDVLLSKSPSSLSANVTSSPKGSPSSSRKSGASCPSSKNSSPNSSPRTLGRNKGRL-RLPQIGSK 1431

  Fly  1030 EKAREQHLKVLDDSDDFSNSSSNSSTSDE---------------------SQTP-ATPLEEQQT- 1071
            .|              .|||..|..||.|                     ||.. .|||:.:.| 
Mouse  1432 NK--------------LSNSKENLDTSKENGAGQICELADTLNRRHVLGGSQPELVTPLDHEITL 1482

  Fly  1072 ---------------------QQAQQPQQPQQLEEAAN------------------------VRA 1091
                                 ..:::.....|.||..:                        .:.
Mouse  1483 ANGFLYEHEACGNGYSNGQLGNHSEEDSTDDQREETHSKPIYNLYAISCHSGILGGGHYVTYAKN 1547

  Fly  1092 PPGKWYYVSDSRVQEVSEDTALKAQAYLLFYER 1124
            |..|||..:||..:|:..|......||:||||:
Mouse  1548 PNCKWYCYNDSSCKELHPDEIDTDSAYILFYEQ 1580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp16-45NP_572220.1 zf-UBP 108..159 CDD:460464
UBP12 <307..990 CDD:227847 165/781 (21%)
Peptidase_C19 307..>512 CDD:470612 60/211 (28%)
Peptidase_C19K <849..1123 CDD:239132 84/396 (21%)
Usp32XP_011247292.1 EFh 237..293 CDD:238008
EF-hand_7 270..342 CDD:463900
UBP12 518..1330 CDD:227847 159/733 (22%)
UCH <1245..1578 CDD:425685 78/370 (21%)
Blue background indicates that the domain is not in the aligned region.

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