DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp16-45 and Usp49

DIOPT Version :10

Sequence 1:NP_572220.1 Gene:Usp16-45 / 31458 FlyBaseID:FBgn0029763 Length:1126 Species:Drosophila melanogaster
Sequence 2:NP_940813.1 Gene:Usp49 / 224836 MGIID:2685391 Length:685 Species:Mus musculus


Alignment Length:1130 Identity:199/1130 - (17%)
Similarity:292/1130 - (25%) Gaps:557/1130 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 CQHIKKAVDAARLRRLLKSTGLL----YECSQCQKLGKTAGSAAGAGASEGAVGPGGNPVTFEFD 105
            |:|:      .|| ||.:...:|    :.|.||             ..:|.|             
Mouse     4 CKHV------GRL-RLAQDHSILNPQKWCCLQC-------------ATTESA------------- 35

  Fly   106 NTLWLCLKCGSQLCGRARHKHALEHYQTPHSDSHALAMNTRSFDIWCYEC-----------DMKI 159
               |.||||....|||....|||:|::   ...|.|||..|...::||.|           |:|:
Mouse    36 ---WACLKCSHVACGRYIEDHALKHFE---ETGHPLAMEVRDLYVFCYLCKDYVLNDNPEGDLKL 94

  Fly   160 CSNLRKNLLECVELVKK--LAQKPPT--ST-----VTPSTPTISYIEEKLKAALEHLTPIVPMTG 215
               ||.:|| .|...|:  ||::..|  ||     |.|...|.....:.|.|.......::..|.
Mouse    95 ---LRSSLL-AVRGQKQDLLARRGRTLRSTAAGEDVVPPQRTPQGQPQMLTALWYRRQRLLAKTL 155

  Fly   216 GSFDDSSSRGSL--------AAAGGGGGVGSSRNRQV------AIPMPPPEPSSGLSTSDSLTSV 266
            ..:...||||..        .|..........|.|:|      .:...||..|:.|     |...
Mouse   156 RLWFQKSSRGRAQLEQRRQEEALERKKEAARQRRREVKRRLLEELASAPPRKSARL-----LLHA 215

  Fly   267 PGMAKRIDQYSATTNGNTGNKRLLTLE--TPRIENERLPRVRGLTNLGNTCFFNAVMQCLAQTPF 329
            ||..       |.........|.|:..  .||.:....|.|.||.||||||:.|:::|.|:....
Mouse   216 PGPV-------AVRPATLATSRRLSAAALNPRRQPAVAPGVTGLRNLGNTCYMNSILQVLSHLQK 273

  Fly   330 LLSVLKELSEPGEEFILPGGTFTIKDKGDIELPMIKGTLSS-------------------WGGLT 375
            .......|.....|.:.|..|     .|..:|.....:.|:                   |.. .
Mouse   274 FRECFLNLDPSTSEHLFPQAT-----NGKAQLSGRPASSSAAELSVRSVRAQGCEPQGLCWSS-G 332

  Fly   376 AALANALEELQ------------------------AGGSVFTPRKLFDRLCVKCPQFTGGDQHDA 416
            |:::.:||.:|                        ...::.:|..:...:....|.|.|.||.||
Mouse   333 ASISRSLELIQNKEPSSKHISLCHELHTLFRVMWSGKWALVSPFAMLHSVWSLIPAFRGYDQQDA 397

  Fly   417 HELLRQLLESVRNEDLKRYQRVILQNLGYKDQDVNSVSEE--MRQKCKIYGNQAGDRILRPEQVF 479
            .|.|.:||..|:.|         |::.|...:.:...|:.  .:|..|:...           :|
Mouse   398 QEFLCELLHKVQQE---------LESEGSTRRILIPFSQRKLTKQVLKVVNT-----------IF 442

  Fly   480 RGFLVSTLTCQDCHNVSSRHEYFLDMSLPVAVEKPQPPQRRKPSPELSLTSSSSSVTPSTGQPTI 544
            .|.|:|.:||..|:..|:..|.|.|:||                                     
Mouse   443 HGQLLSQVTCISCNYKSNTIEPFWDLSL------------------------------------- 470

  Fly   545 NTKFTDGSVNFTASSPSFFLHAHEAASLGPSKSQVKKEKERQRKAKRAAKKRQKSSLNLNGNDSG 609
                                                                             
Mouse   471 ----------------------------------------------------------------- 470

  Fly   610 NGNELAESVDQDDASLASLGAGDGQANDGLEQTNGQTEDSTTSSVTTSEHSDADVEDNLVEDTAA 674
                                                                             
Mouse   471 ----------------------------------------------------------------- 470

  Fly   675 PSTNNVPSSTASLTAPSKTYMDSNGNAQPPGEKRDDTPEHMDKDSLEEDENDSGIATSPAPTATN 739
                                                                             
Mouse   471 ----------------------------------------------------------------- 470

  Fly   740 SSTSTSATGNNNSVAGSGLSGSSGALEDPLAPASLVTAGLSEKGASVIRQVSVGAEQGASNGTED 804
                                                                             
Mouse   471 ----------------------------------------------------------------- 470

  Fly   805 ADGEAKAIEQPEKTPSQAQAMAQAQARTKRVRTQSYSDWSTTIAPRYQC-EDG-------ECSVQ 861
                    |.||                                 ||.| |.|       ||.:.
Mouse   471 --------EFPE---------------------------------RYHCIEKGFVPLNQTECLLT 494

  Fly   862 SCLNNFTAVELMTGQNKVGCDSCTQRINGSDPKAKSVNTNATKQLLVSSPPAVLILHLKRFQLGP 926
            ..|..||..|.:.|: ...||.|..:...|:|| ..|.:.|.|||::...|.||.||||||:...
Mouse   495 EMLAKFTETEALEGR-IYACDQCNSKRRKSNPK-PLVLSEARKQLMIYRLPQVLRLHLKRFRWSG 557

  Fly   927 RCIFRKLTRPVSYPNLLDIAAFCGSKVKNLPNIDRKQKKLLYALYGVVEHSGGMYG-GHYTAYVK 990
            |....|:...|.:..:|.:..:|...:  |.::|:  :...|.|..||.|.|..:| ||||||..
Mouse   558 RNHREKIGVHVIFDQVLTMEPYCCRDM--LSSLDK--ETFAYDLSAVVMHHGKGFGSGHYTAYCY 618

  Fly   991 VRPKVAPGDKRWKFLPHGSKAELDQDDDQLKKLEELLAKE---------------KAREQHLKVL 1040
                    :....|..|.:.::||     :..:||:...:               |..|.||:  
Mouse   619 --------NTEGGFWVHCNDSKLD-----VCSVEEVCKTQAYILFYTRRTVQGSAKLSEPHLQ-- 668

  Fly  1041 DDSDDFSNSSSNSSTSDESQTPATP 1065
                    :..:||:.||.:|...|
Mouse   669 --------AQVHSSSKDERRTYTLP 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp16-45NP_572220.1 zf-UBP 108..159 CDD:460464 21/61 (34%)
UBP12 <307..990 CDD:227847 110/736 (15%)
Peptidase_C19 307..>512 CDD:470612 55/249 (22%)
Peptidase_C19K <849..1123 CDD:239132 68/241 (28%)
Usp49NP_940813.1 zf-UBP 26..87 CDD:460464 25/92 (27%)
UCH 250..651 CDD:425685 116/783 (15%)

Return to query results.
Submit another query.