DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp16-45 and F07A11.4

DIOPT Version :10

Sequence 1:NP_572220.1 Gene:Usp16-45 / 31458 FlyBaseID:FBgn0029763 Length:1126 Species:Drosophila melanogaster
Sequence 2:NP_001364591.1 Gene:F07A11.4 / 174780 WormBaseID:WBGene00008547 Length:1135 Species:Caenorhabditis elegans


Alignment Length:1049 Identity:231/1049 - (22%)
Similarity:343/1049 - (32%) Gaps:374/1049 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 ELVKKLAQKP-PTSTVTPSTPTISYIEEKLKAALEHLTPIVPMTGGS------FDD--SSSRGSL 227
            |..:.:|..| .|||.||      |...:..:|..         ||:      .||  |:|..|:
 Worm   264 EFRRSVAPSPTSTSTTTP------YRSNRYSSATR---------GGNSSSAAPLDDIMSTSYSSV 313

  Fly   228 AAA---------------------------GGGGGVGSSRNRQVAIPMPPPEP----------SS 255
            ||.                           .|......:...|..:|.|||.|          .|
 Worm   314 AATPPPAYSQLSTSTSTLLRTRRERLEREEEGRNSSSMTPQPQSLVPPPPPPPPPPPSAASNGRS 378

  Fly   256 GLSTSDSLTSVPGMAKRIDQYSATTNGNTGNKRLLTLETPRIENERLPRVR----GLTNLGNTCF 316
            |........:|...|.....|..|.       .:|..|..|   |::..|.    ||.|:|||||
 Worm   379 GYLPRSVSAAVISSASSSSVYKPTA-------MVLPYEEDR---EKVCVVEQGYTGLRNIGNTCF 433

  Fly   317 FNAVMQCLAQTPFLLSVLKELSEPGEEFILPGGTFTIKDKGDIEL----------PMIKGT--LS 369
            .|||:|.|.                               .:|||          |.|..|  |.
 Worm   434 MNAVLQMLV-------------------------------NNIELREYFLRNHYQPEINETNPLG 467

  Fly   370 SWGGLTAALANALEELQAG-GSVFTPRKLFDRLCVKCPQFTGGDQHDAHELLRQLLESVRNEDLK 433
            |.|.|..|.|:.:.::.:| .....|.::.:.:..|..||....||||||.|..||:.: :||:.
 Worm   468 SEGRLAKAFADFMHQMWSGHQKAIEPTQIKNIVAEKASQFANFAQHDAHEFLSFLLDGL-HEDVN 531

  Fly   434 RYQRVIL----QNLGYKDQDVNSVSEEMRQKCKIYGNQA-GDRILRPEQV----FRGFLVSTLTC 489
            |.::..|    ::.|..|.||:              |:| .:.|||.:.:    |.|.|.|.:.|
 Worm   532 RVKKKPLTGTVESHGRHDLDVS--------------NEAWKNHILRNDSIFVDLFHGQLKSHVQC 582

  Fly   490 QDCHNVSSRHEYFLDMSLPVAVEKPQP-----PQRRKPSP-ELSLTSSS--------SSVTPSTG 540
            .:|..||...:.|:.:.:|....|...     |...:..| :|:::.|:        |.|:.:..
 Worm   583 PNCDRVSITFDPFVYLPVPFPKNKQSTDLIFWPLENQTKPYKLTVSYSTEGTVADFLSVVSETVR 647

  Fly   541 QPTINTKFTDG---------SVNFTAS---SPS--FFLHAHEAASLGPSKSQVKKE--------K 583
            .||.|.:..:.         |::...|   ||.  |....|:       :.:..:|        :
 Worm   648 VPTRNLRACEAICHKFDKIYSLDMKVSDIVSPDRLFVFQTHD-------EMEFNEEIVILHVLQR 705

  Fly   584 ERQRK-AKRAAKKRQKSSLNLNGNDSGNGNELAESV-DQDDASLASLGAGDGQANDGLEQTNGQT 646
            |..|| .|.|..:...|.|.|...:     |..::| ...:..:|:...| |...:..::...:|
 Worm   706 ELYRKNTKHACHECGNSKLKLKACE-----ECYDAVYCSKECQVANWSTG-GHREECSKRKPSET 764

  Fly   647 ED-----STTSSVTTSEHSDADVE---DNLVEDTAAPSTNNVPSSTASLTAPSKTYMDSNGNA-- 701
            ..     |...|..|.:|....:|   .:.|.....|...:..|...||.|||::....||..  
 Worm   765 VGHPLIVSLPRSQLTYQHLYRVLEAKSRHTVTLFQQPQYESEGSEGDSLQAPSRSIKKRNGVGAP 829

  Fly   702 ----QPPGEKRDDTPEHMDKDSLEEDENDSGIATSPAPTATNSSTSTSATGNNNSVAG------- 755
                |||||                               ::||:|.|:|....|||.       
 Worm   830 PTFLQPPGE-------------------------------SSSSSSVSSTPRRRSVAAEPRTKNQ 863

  Fly   756 --------SGLSGSSG--ALEDPLAPASLVTAGL-------SEKGASVI-----RQVSVGAEQGA 798
                    ||.:.|.|  ::.|..|..||.:.|.       ...|...|     :.:.|..|:..
 Worm   864 KMFEIRKLSGQNDSFGSHSISDDEACQSLESGGYVSVNWINQRNGKPYITIENRKDIDVDVEKSR 928

  Fly   799 SNGTEDADGEAKAIEQPEKTPSQAQAMAQAQARTKRVRTQSYSDWSTTIAPRYQCEDGECSVQSC 863
            ...:.:.:|..|: ...|..|...| |....:.|:|::.:  ..|.                   
 Worm   929 QMNSRNMNGYVKS-NNSETNPHLTQ-MLDLFSETERLKPE--ESWY------------------- 970

  Fly   864 LNNFTAVELMTGQNKVGCDSCTQRINGSDPKAKSVNTNATKQLLVSSPPAVLILHLKRF------ 922
                             |.:|.:            |..|||:|.:...|.|||:.||||      
 Worm   971 -----------------CSTCKE------------NVEATKKLQLYRLPPVLIIQLKRFVYTAFT 1006

  Fly   923 ---QLGPRCIFRKLTRPVSYP-NLLDIAAFCGSKVKNLPNIDRKQKKLLYALYGVVEHSGGMYGG 983
               .:..|   .|.||.|.|| ..||::.|. ::....||      ..:|.|.|||.|||..|.|
 Worm  1007 YQSSMARR---SKDTRSVEYPLESLDMSPFL-AETSPHPN------STMYDLTGVVCHSGNSYFG 1061

  Fly   984 HYTAYVKVRPKVAPGDKRWKFLPHGSKAELDQDDDQLKKLEELLAKEKAREQHLKVLDDSDDFSN 1048
            ||.                      |...|...|....|:|            .:..|||.....
 Worm  1062 HYI----------------------SMGRLADFDSSKTKIE------------WRNFDDSTVARQ 1092

  Fly  1049 SSSNSSTSD 1057
            |:|...|.|
 Worm  1093 STSTLQTED 1101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp16-45NP_572220.1 zf-UBP 108..159 CDD:460464
UBP12 <307..990 CDD:227847 182/795 (23%)
Peptidase_C19 307..>512 CDD:470612 62/226 (27%)
Peptidase_C19K <849..1123 CDD:239132 51/219 (23%)
F07A11.4NP_001364591.1 UBP12 <401..1110 CDD:227847 200/897 (22%)
zf-MYND 716..756 CDD:460312 8/45 (18%)
Blue background indicates that the domain is not in the aligned region.

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