DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp16-45 and Usp33

DIOPT Version :9

Sequence 1:NP_001284890.1 Gene:Usp16-45 / 31458 FlyBaseID:FBgn0029763 Length:1126 Species:Drosophila melanogaster
Sequence 2:NP_573510.2 Gene:Usp33 / 170822 MGIID:2159711 Length:909 Species:Mus musculus


Alignment Length:1091 Identity:203/1091 - (18%)
Similarity:318/1091 - (29%) Gaps:428/1091 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 CQHIKKAVDAARLRRLLKSTGLLYECSQCQKLGKTAGSAAGAGASEGAVGPGGNPVTFEFDNTLW 109
            |.|:....:..:...:.||.|   .|..|:..|.                            .||
Mouse     8 CPHLDSVGEITKEDLIQKSLG---ACQDCKVRGP----------------------------NLW 41

  Fly   110 LCL--KCGSQLCGRARHKHALEHYQTPHSDSHALAMNTRSFDIWCYECDMKICSNLRKNLLECVE 172
            .||  :|....||.::..|:..|.|   ...|.|.:|..:..:|||.|..:            |.
Mouse    42 ACLENRCSYVGCGESQVDHSTIHSQ---ETKHYLTVNLTTLRVWCYACSKE------------VF 91

  Fly   173 LVKKLAQKPPTSTVTPSTPTISYIEEKLKAALEHLTPIVPMTGGSFDDSSSRGSLAAAGGGGGVG 237
            |.:||.       ..||.|.:...::..:.:::                                
Mouse    92 LDRKLG-------TPPSLPHVRQPQQTQENSVQ-------------------------------- 117

  Fly   238 SSRNRQVAIPMPPPEPSSGLSTSDSLTSVPGMAKRIDQYSATTNGNTGNKRLLTLETPRIENERL 302
                 ...||..|...:..::.|:.|..                              .:|.|..
Mouse   118 -----DFKIPSNPALKTPMVAVSEDLDI------------------------------EVEEEDE 147

  Fly   303 PRVRGLT---NLGNTCFFNAVMQCLAQTPFLLSVLKELSEPGEEFILPGGTFTIKDKGDIELPMI 364
            .:.||||   |:||||:.||.:|.|:..|           |..:|.|..|.....||    .|.|
Mouse   148 LKARGLTGLKNIGNTCYMNAALQALSNCP-----------PLTQFFLDCGGLARTDK----KPAI 197

  Fly   365 -KGTLSSWGGLTAALANALEELQAGGSVFTPRKLFDRLCVKCPQFTGGDQHDAHELLRQLLESVR 428
             |..|.        |...|......||| .|..||..:....|.|.|..|.||.|.||.|:: :.
Mouse   198 CKSYLK--------LMTELWHKSRPGSV-VPANLFQGIKTVNPTFRGYSQQDAQEFLRCLMD-LL 252

  Fly   429 NEDLKRYQRVILQNLGYKDQDVNSVSEEMRQKCKIYGNQAGDRILRPEQVFRGFLVSTLTCQDCH 493
            :|:||.      |.:..:::.....|||..::.|...:                 |...:|:.| 
Mouse   253 HEELKE------QVMEMEEEPQTLTSEETVEEEKSQSD-----------------VDFQSCESC- 293

  Fly   494 NVSSRHEYFLDMSLPVAVEKPQPPQRRKPSPELSLTSSSSSVTPSTGQPTINTKFTDGSVNFTAS 558
                                                |||......:|                  
Mouse   294 ------------------------------------SSSEKAENESG------------------ 304

  Fly   559 SPSFFLHAHEAASLGPSKSQVKKEKERQRKAKRAAKKRQKSSLNLNGNDSGNGNELAESVDQDDA 623
            |..|...::|...|...:..::..|:.|:  ::...|..|::.::..:.  :.:.:.|:||.:..
Mouse   305 SKGFPEDSNETTMLIQDEDDLEMAKDWQK--EKVCNKINKANADVELDK--DRDTVCETVDLNSQ 365

  Fly   624 SLASLGAGDGQANDGLEQTNGQTEDSTTSSVTTSEHSDADVEDNLVEDTAAPSTNNVPSSTASLT 688
            ....:.. .|:|::.:  |:....|..||.:..|..|        |....:.|...:.|....|:
Mouse   366 ETVKVQI-HGRASESI--TDVHLNDLATSQILPSNES--------VSPRLSASPPKLGSLWPGLS 419

  Fly   689 APSKTYMDSNGNAQPPGEKRDDTPEHMDKDSLEEDENDSGIATSPAPTATNSSTSTSATGNNNSV 753
            .|.|       .||....||  ..:|....|:..|..|..:.:|......:..:.|..|..:.|:
Mouse   420 PPHK-------KAQSTSAKR--KKQHKKYRSVISDIFDGTVISSVQCLTCDRVSITLETFQDLSL 475

  Fly   754 AGSGLSGSSGALEDPLAPASLVTAGLSEKGASVIRQVSVG---AEQGASNGTEDADGEAKAIEQP 815
            ...|        ::.||...      |....::::..|.|   |.||                  
Mouse   476 PIPG--------KEDLAKLH------SSSHPTIVKAGSCGEAYAPQG------------------ 508

  Fly   816 EKTPSQAQAMAQAQARTKRVRTQSYSDWSTTIAPRYQCEDGECSVQSCLNNFTAVELMTGQNKVG 880
                    .:|......||........|..  .|       ..::|.||..|.|.:.:.|.|...
Mouse   509 --------WIAFFMEYVKRFVVSCVPSWFW--GP-------VVTLQDCLAAFFARDELKGDNMYS 556

  Fly   881 CDSCTQRINGSDPKAKSVNTNATKQLLVSSPPAVLILHLKRFQLGPRCIF-RKLTRPVSYP-NLL 943
            |:.|.:..||            .|...|...|.:|.:|||||:  ...:| .|::..||:| ..|
Mouse   557 CEKCKKLRNG------------VKFCKVQKFPEILCIHLKRFR--HELMFSTKISTHVSFPLEGL 607

  Fly   944 DIAAFCGSKVKNLPNIDRKQKKLLYALYGVVEHSGGMYGGHYTAYVKVRPKVAPGDKRWKFLPHG 1008
            |:..|...        |...:.:.|.|..|:.|.|....|||.||.:                  
Mouse   608 DLQPFLAK--------DSPAQIVTYDLLSVICHHGTASSGHYIAYCR------------------ 646

  Fly  1009 SKAELDQDDDQLKKLEELLAKEKAREQHLKVLDDSDDFSNSSSNSSTSDESQTPATPLEEQQTQQ 1073
                                                   |:.:|                     
Mouse   647 ---------------------------------------NNLNN--------------------- 651

  Fly  1074 AQQPQQPQQLEEAANVRAPPGKWYYVSDSRVQEVSEDTALKAQAYLLFYER 1124
                                 .||...|..|.||||.|...|:||:|||.:
Mouse   652 ---------------------LWYEFDDQSVTEVSESTVQNAEAYVLFYRK 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp16-45NP_001284890.1 zf-UBP 108..159 CDD:280334 17/52 (33%)
Peptidase_C19 307..>512 CDD:271592 52/208 (25%)
Peptidase_C19K <849..1123 CDD:239132 56/275 (20%)
Usp33NP_573510.2 zf-UBP 30..90 CDD:366940 20/102 (20%)
UCH 154..679 CDD:366104 159/821 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 261..315 13/125 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 397..436 11/55 (20%)
DUSP 701..770 CDD:386277
DUSP 807..891 CDD:197831
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5560
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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